Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01474 ATGGAGTGGCAAAGAGGCCACGTCATAGGCCGGGGCTCGTCAGCCACCGTCTCCACCGCCACGTGCTGCGCCGGTGGTGGTGTCTTTGCCGTCAAGTCAGCCGAGTTGTCTCAATCAGAGTCTTTGAAAAGGGAGCAAACAATTTTGTCCTCTCTAAGTAGTCCTTATGTGGTTGCATACAAAGGGTGTGACATTACCATGGACAACAACAAGCTCTTGTTCAACCTCTTCATGGAGTACATGCCCTTTGGCACGGTTGCTCAGGCCACTCGCCGCCACGGTGGCCGGCTGGAGGAGGCGGCTATGGCACGCTACACGAGGCAAATCGTTCAGGGGCTAGAGTACTTGCATTCAAAAGAATTGGTGCATTGTGACATCAAGGGTGCTAATATCTTGATTGGTGAAGATGGGGTGAAAATTGGAGACTTGGGGTACGCCAAGAGTGTGGTGGATTCCGCGGTGGTGATCGGCGGCACGCCGATGTTTATGGCGCCGGAGGTGGCGCGTGGGGAGGAGCAAGGGTGTGCTAGTGACATTTGGTCACTTGGGTGCACTGTGGTTGAAATGGCCACTGGCGGTGTACCATGGCCAAGTGTGGAAGACCCTTTTTCGGTGCTTTATCATATTGCATATTCTAGTGAAGTGCCTGAGATTCCTTGTTTTCTATCTGAGGAAGCAAGGGATTTTCTGGGGAAGTGCTTGAGGAGGAATCCACAAGAGAGGTGGAAGGCTAGTGAACTTTTGAAGCATCCATTTATTGGGAAATTATGTTCCAACAATAAGGAAGTTTTGGAATCTAATTCAAGTTCCCCAACTAGTGTTCTTGAGCAAGGCTATTGGGGCTCTGTGGAAGACTCGGAAAGTGTTGGCAATTTGATTAGCAAAACACAAAAATTTGAACTTTTGGCTGCTGGGAGGGTCAGAATGTTGGCTCTGTCTTCTGGGGTAGCCTGTTGGGCACAACATGATGATGAAAACTGGATCACAGCCAGAGGGAATGGTGGGAAAGGTTTTGGCAATTGTGGGTCAGGGACAGCCTCTGCTAGTCATGGGTTGTCTCTCTAG 1065 0.5033 MEWQRGHVIGRGSSATVSTATCCAGGGVFAVKSAELSQSESLKREQTILSSLSSPYVVAYKGCDITMDNNKLLFNLFMEYMPFGTVAQATRRHGGRLEEAAMARYTRQIVQGLEYLHSKELVHCDIKGANILIGEDGVKIGDLGYAKSVVDSAVVIGGTPMFMAPEVARGEEQGCASDIWSLGCTVVEMATGGVPWPSVEDPFSVLYHIAYSSEVPEIPCFLSEEARDFLGKCLRRNPQERWKASELLKHPFIGKLCSNNKEVLESNSSSPTSVLEQGYWGSVEDSESVGNLISKTQKFELLAAGRVRMLALSSGVACWAQHDDENWITARGNGGKGFGNCGSGTASASHGLSL* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01474 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Phac11g01474 354 FunFam Mitogen-activated protein kinase kinase kinase 17 2 306 - -
Phac11g01474 354 Pfam Protein kinase domain 4 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01474 354 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Phac11g01474 354 CDD STKc_MAPKKK 2 253 - -
Phac11g01474 354 Gene3D Transferase(Phosphotransferase) domain 1 1 311 - -
Phac11g01474 354 SMART serkin_6 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01474 354 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01474 354 SUPERFAMILY Protein kinase-like (PK-like) 3 273 IPR011009 -
Phac11g01474 354 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01474 Phac-Chr11 12116857 12118243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01474 1 333 MAP Kinase Kinase Kinase AT1G05100 48.159 5.64e-104 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phac11g01474 Pkinase 4.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01474 K20716 - gmx:100819665 590.497