Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01473 ATGGTTAGAGGTGGTGGACTCTCCATGGATTCAGATCCAATTGGGAGCTTCTTCCTCCACAAGCCTATTGTTCTCAACTCTTTCCCTGAAGACACAAACCACGCCAAGTGGAAACTTAGTCCCCACAACAACATGGAAGCCACTGTTAGCACCAAAGACACCATCCCCTTCCAAGTCAACCTTAGCTGTTCTCCAAACAATCATGACTCTTCGCCATCATCCCTCCACAACAGAACCGAGATGGACTTCTTCTCCGACAACAACAAGAAGGAGCACAACGTTTCCGCTTCTGCCTCTAATCATCATCATTCACCCACTCCACCTACGTTGGAATTCAAAGTGAACACTGGTCTGAATCTTCTTACTGCCAACACTAGCAGTGATCAATCTATGGTGGATGATGAGATATCACCCAATTCAGAAGACAGAAGAGCTAAGAATGAGGTTGCTGCTCTTCAAGCTGAGCTTGAGAGAATGAAGAGGGAGAATCAAAAGTTGAGGAACACGCTTGATCAGGTTAACGTCAATTACGATGCACTTCAGATGCATTTTATGAATTTGATGCAGCAGCAGAAGGCGGAGGAAGCTGAAGAACAAGAAGTGATTGGTGGAAAGTTAGAAGAGAAGAAGCAAGGTGAGAGTAGCGGGGTATTGGTGCCAAGACAGTTCATGGATCTTGGATTGGCTACGAATGCTGACACTGACGAACCCTCTTCTTCATCAGGGGGAAGAAGTCAAGATCGATCAGGATCACCCCACGCAGAAGTGGCTTCGAAGGAATTAGGGACCGGTAAGAGTGAGATTGTTAATGACGAAGGGTATGACCAAGAGAAGAAGGAATATGGTAGAGGGGTTGAAAGTGAGGATAGTCCCTCAGGACATGCTTTTTCTGGTGATAAAGTTCCAAGGTTCAGTCCTCAAAAGAATAACGTTGAACAGGCTGAGGCAACCATGAGGAAGGCAAGAGTTTCCGTTAGAGCTCGATCAGAAGCTCCCATGATCACTGATGGTTGTCAATGGAGAAAGTATGGGCAGAAGATGGCCAAAGGAAACCCATGTCCTAGAGCTTATTATAGGTGTACCATGGCTGCAGGTTGCCCAGTTAGAAAACAGGTACAAAGGTGTGCTGAAGACCGAACAGTCCTCATCACAACCTATGAAGGCAATCACAACCATCCTTTGCCTCCAGCAGCTATGGCAATGGCACAAACCACTTCCTCAGCAGCAAGAATGCTTCTTTCTGGGTCAATGTCTAGTGCTGACAGCCTAATGAATGCAAACTTACTCACAAGGACACTTCTCCCTTGCTCTTCAAGCATGGCTACTATCTCAGCATCTGCTCCATTCCCAACTGTTACATTGGACCTGACACAATCTCCAAACCCTCTACAGTTTCCAAGGCACCAAAACCAGTTACAAATTCCCCTCCAAGGTGTCCCTCAGAATTTTGCAAACTCCCCAGCCTCTTTAATGCCTCAGATATTTGGACAAGCACTCTACAATCAATCAAAGTTTTCTGGTCTTCAAATGTCACATGATGCAGACCCTTCACAAATTGGTAACCACCCTCAGCAGGTACCACCACACCTTACTGACACAGTTAGTGCTGCCATTGCTGCTGATCCAAACTTCACTGCAGCTTTGGCTGCAGCTATCACTTCCATTATTGGTGGTGCTCAGCAACACAACACCAACAGCAACAACAGTAATAATAGTAACAACAATGGCAACATGACAGCCAGCAACAGCACCGGCAATGGCAACATCACGAGTAGCAACAACAGCAACGGAAAGCAATAA 1800 0.4617 MVRGGGLSMDSDPIGSFFLHKPIVLNSFPEDTNHAKWKLSPHNNMEATVSTKDTIPFQVNLSCSPNNHDSSPSSLHNRTEMDFFSDNNKKEHNVSASASNHHHSPTPPTLEFKVNTGLNLLTANTSSDQSMVDDEISPNSEDRRAKNEVAALQAELERMKRENQKLRNTLDQVNVNYDALQMHFMNLMQQQKAEEAEEQEVIGGKLEEKKQGESSGVLVPRQFMDLGLATNADTDEPSSSSGGRSQDRSGSPHAEVASKELGTGKSEIVNDEGYDQEKKEYGRGVESEDSPSGHAFSGDKVPRFSPQKNNVEQAEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTVLITTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSADSLMNANLLTRTLLPCSSSMATISASAPFPTVTLDLTQSPNPLQFPRHQNQLQIPLQGVPQNFANSPASLMPQIFGQALYNQSKFSGLQMSHDADPSQIGNHPQQVPPHLTDTVSAAIAADPNFTAALAAAITSIIGGAQQHNTNSNNSNNSNNNGNMTASNSTGNGNITSSNNSNGKQ* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01473 599 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 116 571 IPR044810 GO:0003700
Phac11g01473 599 MobiDBLite consensus disorder prediction 61 80 - -
Phac11g01473 599 MobiDBLite consensus disorder prediction 562 599 - -
Phac11g01473 599 MobiDBLite consensus disorder prediction 232 252 - -
Phac11g01473 599 ProSiteProfiles WRKY domain profile. 329 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac11g01473 599 Pfam WRKY DNA -binding domain 336 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac11g01473 599 Coils Coil 142 183 - -
Phac11g01473 599 MobiDBLite consensus disorder prediction 270 287 - -
Phac11g01473 599 SMART WRKY_cls 334 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac11g01473 599 SUPERFAMILY WRKY DNA-binding domain 327 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac11g01473 599 MobiDBLite consensus disorder prediction 508 528 - -
Phac11g01473 599 FunFam probable WRKY transcription factor 31 319 396 - -
Phac11g01473 599 MobiDBLite consensus disorder prediction 230 312 - -
Phac11g01473 599 MobiDBLite consensus disorder prediction 195 214 - -
Phac11g01473 599 MobiDBLite consensus disorder prediction 195 216 - -
Phac11g01473 599 Gene3D WRKY domain 319 396 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01473 Phac-Chr11 12087682 12090973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01473 80 570 WRKY Transcription Factor Family AT1G62300 51.378 3.06e-136 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac11g01473 WRKY 4.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01473 - - gmx:100797998 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g01473 11 12087682 12090973 Phac6g02111 6 20889026 20891733 ECH
Phac11g01473 11 12087682 12090973 Phac11g01473 11 12087682 12090973 ECH