Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01463 ATGTTCAACGGTATGATGGATCCGGATTTGATGAGGATCGCTCAGGAGCAGATGAGTCGCATGTCACCTGCTGAGTTGGCTCGGATCCAACAACAGATGATGTCTAATCCAGAGCTGATGAGGATGGCCTCGGAGAGCATGAGGAACATGAGTTCTGAAGACTTTAAACTTGCGGCTGAGCAGTTAAAGCATACCCGTCCGGAAGAAATGGCTGAGATTGGTGAGAAGATGGCCAATGCGTCCCCTGATGAAGTGGCAGCGATGCGATCCCGGGTTGATGCCCAGATCAAATATCAGTTGAGTGCAGCTGAGATGTTGAAGAAGCAGGGCAATGAACTTCATAGTCAAGGAAAGTTCAGTGAAGCTTTGAAGAAGTATATGCTTGCTAAAGAAAACATTAGAGAGATTCCATCTTTCCAAAGTAGAAAGCTTCTTTTGGCATGTTCTCTCAACTTGATGTCCTGTTACTTGAAGACAAGGCAGTATAATGAGTGCATAAAAGAAGGTTCTGAGGTTCTGGCATATGACTCGAAGAACCTTAAGGCTCTTTATCGAAGAGGTCAAGCATATAAGGAACTAGGTCGATTAAATGATGCTGTTTATGATCTGAGCAAGGCACTTGAAGTTTCCCCTGATGATGATACAGTTGCAGAGCTTTTACGGGATGCCAAGGAAAAATTGACAATGGGAGGTGGTGAGCAATCGACTAGTGGACTTGTAATCGAAGAAATAACTGAAGAAGGCGAGGATGTGCCTCCTCGAAGCTCTTTGGAACAAACAGTGGTTCAAAAAAAATCTAGTGACACGTCTAAGACTAGCAGTACAGCTAACAATGGAAATCCAAAATCAAGTGCAGACAGTTTAGATGCATTGAGAAAAGATCCTGAAGCTGTCAGGTCATTCCAGAACTTCATTTCAAACACCAATCCTGCCACGCTGGCCTCTCTGAATGCTGGCCAATTCAAAGATGTGTCCCCAGATATGATCAAAACTACCTCTGATATGATTAGTAAGATGGCGCCTGATGAACTGCAAAAAATGCTTGACATGGCTTCTTCATTTCAAGGGGACAACCAATTTTTTAGAGGAGGTCCCCCTGATTCTTCTTTCAACCCAGGATCAATGCCTCCCAATGTGACACCTGACATGTTTAAAGCAGCAAGTGATATGATAAGTAAAATGCCAGCTGATGACCTTAAGAAGATGTTTGAAATGGCATCCTCACTGAAAGGGAAAGAATCTATTCCATCAGCAGCAGCAGTAGATGATATCCAAAGAAAGGTTTATCAGTCAAACATCCCATCATCAAGTACTAATGAAACTACTAATTTTGGGGAATCAAGTTCATCTCGTAATGTGTTTTCCAATATGAGAAGTGCTTCTCAGTCTAACTTTCCTTCCTCGAGTACTGATCTACAAGAACAGATGAAAAACCAGATGAAAGATCCAGCCATGCGGCAGATGTTCACATCCATGATTAAAAATATGAGCCCAGAAATGATGGCAAACATGGGTGAACAATTTGGTGTCAAACTTTCACCAGAAGAGGCAGCTAAAGCTCAGAAAGCCGTCTCATCCATGTCACCGGAGAGCTTGGATAAAATGATGCTTTGGGCAGACAGGCTTCAAAGAGGAGTTGAATCTGCAAAAAAGACAAAGAACTGGCTGCTAGGGAGGCCTGGAATGATCTTAGCAATATGCATGCTCATTTTGGCTGTCATTCTTCACCGGTTAGGCTTCATTGGTGGCTAG 1752 0.4315 MFNGMMDPDLMRIAQEQMSRMSPAELARIQQQMMSNPELMRMASESMRNMSSEDFKLAAEQLKHTRPEEMAEIGEKMANASPDEVAAMRSRVDAQIKYQLSAAEMLKKQGNELHSQGKFSEALKKYMLAKENIREIPSFQSRKLLLACSLNLMSCYLKTRQYNECIKEGSEVLAYDSKNLKALYRRGQAYKELGRLNDAVYDLSKALEVSPDDDTVAELLRDAKEKLTMGGGEQSTSGLVIEEITEEGEDVPPRSSLEQTVVQKKSSDTSKTSSTANNGNPKSSADSLDALRKDPEAVRSFQNFISNTNPATLASLNAGQFKDVSPDMIKTTSDMISKMAPDELQKMLDMASSFQGDNQFFRGGPPDSSFNPGSMPPNVTPDMFKAASDMISKMPADDLKKMFEMASSLKGKESIPSAAAVDDIQRKVYQSNIPSSSTNETTNFGESSSSRNVFSNMRSASQSNFPSSSTDLQEQMKNQMKDPAMRQMFTSMIKNMSPEMMANMGEQFGVKLSPEEAAKAQKAVSSMSPESLDKMMLWADRLQRGVESAKKTKNWLLGRPGMILAICMLILAVILHRLGFIGG* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01463 583 MobiDBLite consensus disorder prediction 246 288 - -
Phac11g01463 583 SUPERFAMILY TPR-like 96 226 IPR011990 GO:0005515
Phac11g01463 583 Gene3D Tetratricopeptide repeat domain 89 233 IPR011990 GO:0005515
Phac11g01463 583 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 4 358 - -
Phac11g01463 583 Pfam Tetratricopeptide repeat 181 213 IPR001440 GO:0005515
Phac11g01463 583 MobiDBLite consensus disorder prediction 431 477 - -
Phac11g01463 583 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Phac11g01463 583 ProSiteProfiles TPR repeat region circular profile. 180 213 - -
Phac11g01463 583 MobiDBLite consensus disorder prediction 256 285 - -
Phac11g01463 583 SMART tpr_5 146 179 IPR019734 GO:0005515
Phac11g01463 583 SMART tpr_5 103 136 IPR019734 GO:0005515
Phac11g01463 583 SMART tpr_5 180 213 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01463 Phac-Chr11 11986089 11991559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01463 93 227 Calmodulin-binding Proteins AT5G48570 36.879 2.98e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01463 - - gmx:100800315 975.311