Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01455 ATGTCAATGGAAATGATGGCAACGGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCTTACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGACATTGTGCTAATTTGCTATCAGTTAACATGGGAGCGTCCCTTCAAACATTTCCTCCTCAAGAGCCTCAGTCACAGAAACAGCACCTAAGCTTTGAAGAACCAAGCAGCAAGGAACTGGGATCCTCATCTTCAAAATGTAACAAAATAGCGGCATTTGAGGCAGTAGAGCATGAACAACCAAGGATTCCTCCCATTCGTCCTACAGAGAAGAGACATCGTGTGCCTTCTGCATATAATCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCAGATATCAGCCACAGGGAGGCTTTCAGCTCCGCAGCCAAAAACTGGGCACATTTCCCTCACATTCACTTTGGGTTAAAGCTGGATGGCAACAGTCAAGCAAAGTTGGACCAGGGAGAAGCAGCTGAAAAGTCCAATGGATTCTACTGA 552 0.4493 MSMEMMATERVCYVHCNFCNTILAVSVPYSSLLTIVTVRCGHCANLLSVNMGASLQTFPPQEPQSQKQHLSFEEPSSKELGSSSSKCNKIAAFEAVEHEQPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQAKLDQGEAAEKSNGFY* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01455 183 Gene3D High mobility group box domain 109 178 IPR036910 -
Phac11g01455 183 SUPERFAMILY HMG-box 105 153 IPR036910 -
Phac11g01455 183 MobiDBLite consensus disorder prediction 58 85 - -
Phac11g01455 183 CDD HMG-box_SF 114 150 - -
Phac11g01455 183 Pfam YABBY protein 7 160 IPR006780 GO:0007275
Phac11g01455 183 FunFam axial regulator YABBY 5-like 98 156 - -
Phac11g01455 183 PANTHER PROTEIN YABBY 6-RELATED 1 169 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01455 Phac-Chr11 11829371 11835873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01455 1 183 C2C2-YABBY Transcription Factor Family AT1G08465 65.426 6.98e-83 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Phac11g01455 YABBY 4.3e-71 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01455 K25796 - gmx:100500026 336.65