Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01454 ATGTCAATGGAAATGATGGCAACGGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTTCCTTACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGACATTGTGCTAATTTGCTATCAGTTAACATGGGAGCGTCCCTTCAAACATTTCCTCCTCAAGAGCCTCAGAAACAGCACCTAAGCTTTGAAGAACCAAGCAGCAAGGAACTGGGATCCTCATCTTCAAAATGTAACAAAATAGCGGCATTTGAGGCAGTAGAGCATGAACAACCAAGGATTCCTCCCATTCGTCCTACAGAGAAGAGACATCGTGTGCCTTCTGCATATAATCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCAGATATCAGCCACAGGGAGGCTTTCAGCTCCGCAGCCAAAAACTGGGCACATTTCCCTCACATTCACTTTGGGTTAAAGCTGGATGGCAACAGTCAAGCAAAGTTGGACCAGGGAGAAGCAGCTGAAAAGTCCAATGGATTCTACTGA 546 0.4487 MSMEMMATERVCYVHCNFCNTILAVSVPYSSLLTIVTVRCGHCANLLSVNMGASLQTFPPQEPQKQHLSFEEPSSKELGSSSSKCNKIAAFEAVEHEQPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQAKLDQGEAAEKSNGFY* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01454 181 MobiDBLite consensus disorder prediction 60 83 - -
Phac11g01454 181 FunFam axial regulator YABBY 5-like 96 154 - -
Phac11g01454 181 SUPERFAMILY HMG-box 103 151 IPR036910 -
Phac11g01454 181 CDD HMG-box_SF 112 148 - -
Phac11g01454 181 Pfam YABBY protein 7 158 IPR006780 GO:0007275
Phac11g01454 181 PANTHER PROTEIN YABBY 6-RELATED 1 167 IPR006780 GO:0007275
Phac11g01454 181 Gene3D High mobility group box domain 107 176 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01454 Phac-Chr11 11829371 11836167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01454 1 181 C2C2-YABBY Transcription Factor Family AT1G08465 64.894 2.71e-82 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Phac11g01454 YABBY 2.8e-70 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01454 K25796 - gmx:100500091 335.88