Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01452 ATGTCAGGTTCTGAGCGTTGCTGCTATTGTATGGATGTATTGAATGTGCCACACCACACCACACTCTCCCTAGCTGGACACTGGACACACCCCTTAAAAGTTAGTGTTCCTTACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGACATTGTGCTAATTTGCTATCAGTTAACATGGGAGCGTCCCTTCAAACATTTCCTCCTCAAGAGCCTCAGAAACAGCACCTAAGCTTTGAAGAACCAAGCAGCAAGGAACTGGGATCCTCATCTTCAAAATGTAACAAAATAGCGGCATTTGAGGCAGTAGAGCATGAACAACCAAGGATTCCTCCCATTCGTCCTACAGAGAAGAGACATCGTGTGCCTTCTGCATATAATCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCAGATATCAGCCACAGGGAGGCTTTCAGCTCCGCAGCCAAAAACTGGGCACATTTCCCTCACATTCACTTTGGGTTAAAGCTGGATGGCAACAGTCAAGCAAAGTTGGACCAGGGAGAAGCAGCTGAAAAGTCCAATGGATTCTACTGA 573 0.4572 MSGSERCCYCMDVLNVPHHTTLSLAGHWTHPLKVSVPYSSLLTIVTVRCGHCANLLSVNMGASLQTFPPQEPQKQHLSFEEPSSKELGSSSSKCNKIAAFEAVEHEQPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQAKLDQGEAAEKSNGFY* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01452 190 MobiDBLite consensus disorder prediction 69 90 - -
Phac11g01452 190 CDD HMG-box_SF 121 157 - -
Phac11g01452 190 Pfam YABBY protein 32 167 IPR006780 GO:0007275
Phac11g01452 190 Gene3D High mobility group box domain 116 185 IPR036910 -
Phac11g01452 190 SUPERFAMILY HMG-box 112 160 IPR036910 -
Phac11g01452 190 PANTHER PROTEIN YABBY 6-RELATED 32 176 IPR006780 GO:0007275
Phac11g01452 190 FunFam axial regulator YABBY 5-like 105 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01452 Phac-Chr11 11829371 11835873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01452 32 190 C2C2-YABBY Transcription Factor Family AT1G08465 64.458 6.51e-69 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Phac11g01452 YABBY 8.3e-56 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01452 K25796 - gmx:100500091 285.804