Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01451 ATGAATGCATGTTTTACTGTATGTATACAAGTGAAGAGGATGTTCTTATACCCACTTTTCTACTTCATTTTATTTATATTTGTAAGTAATAATAATATTTGTTATGTATTTGAAAATGGGTATTGGCAGGTTAGTGTTCCTTACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGACATTGTGCTAATTTGCTATCAGTTAACATGGGAGCGTCCCTTCAAACATTTCCTCCTCAAGAGCCTCAGAAACAGCACCTAAGCTTTGAAGAACCAAGCAGCAAGGAACTGGGATCCTCATCTTCAAAATGTAACAAAATAGCGGCATTTGAGGCAGTAGAGCATGAACAACCAAGGATTCCTCCCATTCGTCCTACAGAGAAGAGACATCGTGTGCCTTCTGCATATAATCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCAGATATCAGCCACAGGGAGGCTTTCAGCTCCGCAGCCAAAAACTGGGCACATTTCCCTCACATTCACTTTGGGTTAAAGCTGGATGGCAACAGTCAAGCAAAGTTGGACCAGGGAGAAGCAGCTGAAAAGTCCAATGGATTCTACTGA 603 0.4113 MNACFTVCIQVKRMFLYPLFYFILFIFVSNNNICYVFENGYWQVSVPYSSLLTIVTVRCGHCANLLSVNMGASLQTFPPQEPQKQHLSFEEPSSKELGSSSSKCNKIAAFEAVEHEQPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQAKLDQGEAAEKSNGFY* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01451 200 SUPERFAMILY HMG-box 122 170 IPR036910 -
Phac11g01451 200 CDD HMG-box_SF 131 167 - -
Phac11g01451 200 PANTHER PROTEIN YABBY 6-RELATED 30 186 IPR006780 GO:0007275
Phac11g01451 200 FunFam axial regulator YABBY 5-like 115 173 - -
Phac11g01451 200 Pfam YABBY protein 30 177 IPR006780 GO:0007275
Phac11g01451 200 Gene3D High mobility group box domain 126 194 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01451 Phac-Chr11 11829371 11835873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01451 24 200 C2C2-YABBY Transcription Factor Family AT1G08465 59.358 5.53e-70 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Phac11g01451 YABBY 6.7e-58 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01451 K25796 - gmx:100500091 289.656