Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01439 ATGGCGACGTACTTTCATGGTAGCACTTCAGAAATCCCTTCCTCCGCTGAAGGGTTGCAGACACTTTACCTTATGAATCCAAACTACGTACCGTACTCTGACGCGGCGCAACACCCAGCGCAAAACATGCTCCTCGTCAATTCCAATAACGCTAGTAACACTAGCCCCACTTCCGCCAACGCGCTCAACTTGGGTAACTTCACCCACGCGCCACCACCTCCATCTCCCAACAACCACCGCGACCAACAACACCACCACCACCTGATTGGGCTTACCATTCCCTCATCAAACATCATCGGATCCAATACCGCCACCGGAGATCACGCTCGCTCATCGTTCCTTGGACACAATGAATTCTCCGGGTTTCACGGCGGTGCTACCGCTGCAACAACAGCGTCAACTTCTCGTTCTAACTATAACTTATGGGGTTCCATATTTGATCAGTCTGCTTCGAATATGGTGGCAACAACAAACACCCCATCTGAAAATATGGGGTGTGTTGCCTCTGCTGTCACTGCATCGACCCAGATTGGTTTTCATAGGCCTAATCATTTGTCGCTGAGCCTTTCTTCACAACAAACACCTTACAGGTCTTTATCCGGGGATGTTCATGCTATATCTCCGGCGAGCCTCGGCGGTGATGATATGAGGGGTTTGCAGAACGGGGTTTCTAGCATGCATAGTGTTGCTTTGGGTTCCAAGTATTTGAAATCAACACAAGAGCTTCTTGACGAAGTTGTGAATGTGGGGAAGGGAATCTGCAAAGGGAGAGAATCTATGGAAGGGGCTAAGAAAGAGAAGATGAAGGGGAATATTGAATCAACTTCTGGGGTTGGCGATGGTTCGAGCTGTGGAGGGGAGAATAACGATGGAGGGAAACAAGGAGGTGAACTCGGCACGGCACAGAGACAAGAGCTTCAGATGAAGAAATCCAAGCTTGTGAGCATGCTCGATGAGGTGGAGCAAAGGTACCGACAGTATCACCACCAAATGCAAATTGTGGTAACATCATTTGAGCAGGCTGCGGGTGTTGGAGCGGCAAAGTCTTACACAGCCCTTGCGTTGAGGACAATCTCAAAACAATTTCGGTGTCTCAAAGATGCTATCTCTTCGCAAATCAAGACAGCGAGCAAGACCTTGGGTGAAGATGATTGCTTAGGAGTTAAGGTAGAAAGTTCAAGGCTTAGGTACGTTGATCATCAACTGAGACAACAACGTGCGTTGCAGCAGCTAGGAATGATCCAACACAATGCTTGGAGGCCCCAAAGAGGCTTGCCTGAACGTGCTGTTTCTGTTCTTCGTGCTTGGCTTTTTGAGCATTTCCTGCACCCCTATCCTAAGGACTCCGACAAGGTTATGCTTGCAAAACAAACAGGGCTTACTCGGAGCCAGGTGTCTAACTGGTTTATAAATGCCCGAGTTCGGCTATGGAAGCCAATGGTTGAAGAAATGTACTTGGAAGAGGTGAAGCAAGAACCAAACAATGGCTCCCAGGACAACAACACAAATAGATCAAAAGAAAATAACAAAGAGTTATGGTCAGAAGCTAATGCTGCTACACATGAATCTGGTGGCTTGAGACTTAATCAAATTAATGTTCTCCAATCAAAGGAAGAAAGTTTCAACAATAATCAAACCACTTCCCCTACAGAAATCTCCAATTCTAATTCACTCTCAACATCTCCAATGGGAGGAGGAGGAGGAGGAGGGTCTCTCCAATCTGGTTTCCATCTTGGGGATATGCAAAGTCCAAAAAGGCCGAGAAGCACTTCTGAAATGCAAAACTCTCCGGGTAGCATCCTTTCAGTGGACATGGAAATGAAGCCTCATGGAGAGACAAACACTAGAGAAGGAACCAACACAAAGTTTGGCATTGAAAACCACAGTGGGGGTTTTGGAGCATTTCCCATGGAAGACATTGGAAGGTTCCATCATGTCAGTGAACAACTGGCTCCAAGGTTTCATGGAAACGGAGTTTCTCTCACTCTTGGACTTCCACACAGTGAGAATCTTACTCTCTCGGCAACTCAGCATGGATTCCTCTCACCGAATATGCACTTGGGAATGAGAACAACCAATGAAAATGAGTTTTGTGGTGCCATCAACACCCCACCTTCTTCTCATTCAGCCACCAGTTATGATAACATCGACATCCAAAACAGAAAGAGGTTCGCTGCGCAGTTGTTGCGGGATTTCGTGGCCTGA 2205 0.4721 MATYFHGSTSEIPSSAEGLQTLYLMNPNYVPYSDAAQHPAQNMLLVNSNNASNTSPTSANALNLGNFTHAPPPPSPNNHRDQQHHHHLIGLTIPSSNIIGSNTATGDHARSSFLGHNEFSGFHGGATAATTASTSRSNYNLWGSIFDQSASNMVATTNTPSENMGCVASAVTASTQIGFHRPNHLSLSLSSQQTPYRSLSGDVHAISPASLGGDDMRGLQNGVSSMHSVALGSKYLKSTQELLDEVVNVGKGICKGRESMEGAKKEKMKGNIESTSGVGDGSSCGGENNDGGKQGGELGTAQRQELQMKKSKLVSMLDEVEQRYRQYHHQMQIVVTSFEQAAGVGAAKSYTALALRTISKQFRCLKDAISSQIKTASKTLGEDDCLGVKVESSRLRYVDHQLRQQRALQQLGMIQHNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEVKQEPNNGSQDNNTNRSKENNKELWSEANAATHESGGLRLNQINVLQSKEESFNNNQTTSPTEISNSNSLSTSPMGGGGGGGSLQSGFHLGDMQSPKRPRSTSEMQNSPGSILSVDMEMKPHGETNTREGTNTKFGIENHSGGFGAFPMEDIGRFHHVSEQLAPRFHGNGVSLTLGLPHSENLTLSATQHGFLSPNMHLGMRTTNENEFCGAINTPPSSHSATSYDNIDIQNRKRFAAQLLRDFVA* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01439 734 Gene3D - 422 501 - -
Phac11g01439 734 MobiDBLite consensus disorder prediction 539 604 - -
Phac11g01439 734 MobiDBLite consensus disorder prediction 539 567 - -
Phac11g01439 734 SMART prehox3 224 371 IPR006563 -
Phac11g01439 734 Pfam Associated with HOX 231 370 IPR006563 -
Phac11g01439 734 CDD homeodomain 419 480 IPR001356 GO:0003677
Phac11g01439 734 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 87 502 - -
Phac11g01439 734 MobiDBLite consensus disorder prediction 488 509 - -
Phac11g01439 734 SMART HOX_1 419 483 IPR001356 GO:0003677
Phac11g01439 734 Coils Coil 303 323 - -
Phac11g01439 734 MobiDBLite consensus disorder prediction 264 297 - -
Phac11g01439 734 MobiDBLite consensus disorder prediction 584 601 - -
Phac11g01439 734 Pfam Homeobox KN domain 436 475 IPR008422 GO:0003677|GO:0006355
Phac11g01439 734 ProSiteProfiles 'Homeobox' domain profile. 416 479 IPR001356 GO:0003677
Phac11g01439 734 FunFam BEL1-like homeodomain protein 9 422 484 - -
Phac11g01439 734 SUPERFAMILY Homeodomain-like 420 485 IPR009057 -
Phac11g01439 734 MobiDBLite consensus disorder prediction 275 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01439 Phac-Chr11 11557035 11562527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01439 1 734 Homeobox Transcription Factor Family AT2G35940 42.119 2.22e-128 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Phac11g01439 POX 3.1e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01439 - - gmx:100786883 1156.35