LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac11g01434	ATGGGGTTTTTGCTCAAAGAGGTTTTGAGGACTCTGTGCTCAAGGAATCGCTGGTCTTATGCCGTGTTTTGGAAGATCGGTTGCAACAATTCCAAGCTGTTAATCTGGGAAGATCACTACTATGAACCCTTGCCATCTCCTTTCCCTCCACGAACTGTTGGGATGTCTAATTTTCCATACCGAGACGGGGAAGGGTGCTGGTTTTCTTCTGAGTCTCAACTGGGGATTCAGGAGGAGGACAGAGTCGGTGGATTGATTAACAAAATGATAGTGAATAATTCCGTCAGTATTGCTGGAGAAGGGATCGTTGGACGGGCAGCATTTACAGGAAACTATCAGTGGATTCTTATGAACAATTTCAGTAGAGATGCGTATCCACCAGAGGTATATCCTGAGTTGCATTACCAATTTTCTGCTGGAATGCAGACAGTAGCAGTTATTCCTGTGCTTCCCCATGGCGTTGTTCAATTTGGTTCTTTATTGCCAATAATGGAAGATATTGGATTTGTGAATGATGTGAAGAACTTGATCTTGCAATTGGGATGTGTACCTGCTGCACTTCTTTCTGAAGACTATTCAGCAAAAGTTTCTAATGAAAGACTTGGTGTACCTGTCACTCTTGATCCACCTGTCGATACTTCTAACTGCACTCCCTGTGCAGCTAATGGCTCCTCCCAACTAACTAATTCTACTCTTGCTTCAAGGCCTGTTGCTCCATTACCTCATCCACCAAGGGGTGAAATAGATAATTACCAGGATTCTGTATTGACACCTCAAACCTATGACCCAAACCAAATATTTGATAGCATTTGCCAACCTAAGGCTCATTCAATGATCAAAATAAATGCATATGGCCAACAGAAGAAGAGAGTCATCCAGGCTGAAGCTAAAGTGATACCTGCAAATTTGGATTCATGTATGCAACAACATTCTGCTTATAATGCCAGATCTGCATTCAATGAATTAGCTGGCTTCAATCAATCAAATCTTAGTTGCAGCCTTAACTATATGGAACAACAAACATCAGGTGTTGGCAGACAGAATCACGTTAATCCCAACATGAATCCATCAAGTGCCTCAAATATACCTCAACTGAAAACAGGTGGAGGCAAAATTCTTGAGCAGAATCTGAGTTCTGGTAGCAATTCACCATTTGGAGGAATCCCAATATGTGGTGGGAGTAATCTTTTGAGGACAAATATGATTAACTGCTCTGTTTCAAATTCTCCCAAAGTACCCACTTCTGAATTTTCTGGAACTCACAAGATTGGGTTTGGACTTCAAAATAACAATTCAACAACTGATGCTGGGCTGTGTTCTGTGCCTAATCTCTGTAATCAAACAGTTACCAGTCAAGTGAATCTAGAAAACTCTGCTCAGAACCTTCCCAATGCTTGTGATGCTTTCGTTTCAACTGATCAAAGGATACATGACGATTTGTTTCATGCTGCTCTTAAGATTCCATCTCTTCATCTTGATGAGCATGAGCCTATGGGTGATCGTATCCCTGGTTTTGTTCAAGATTGCCTCAATAAAGATGTTACTAGTCAAAATATGGTGAAAAGGAATGTTAAACATGAAGAGACCTATACTCAACTTCCATCAGGGGATGATCTCTTTGATGTTTTAGGTGTGGATTTGAAAAGGCGACTACTCAATGGAAACTGGGATAAGTTGCTTGCCACTGATTCAGAGGCCAACAGAGAGCGTCTAGATAAAAAGGCAGCATGCATGAATTTGGAAGGTGTATGTCCTGATAATAGCTATTCAGTTAAAGATGCAATATCAGAGAGTGGCATCTTCTCTGGAACGGGCTCTGACCACCTCTTAGACGCTGTAGTTTCAAAAGCTCAATTGGCCCCAAAACAGAGTTCTGATGAAATGTCTTGCAGGACAACATTGACCAGGGTTAGCACTGCCTCAGTTTCCTCGCCTGCCTGCAAGCAGGTTCTGTCTGATCATGTCCTGAAGGGATTGTTTGATTTTCCCAAGAATGGGGCTAAAAGAGCTGCTGGGGAAACAAGTTCTCCTAGGTCTGGGTGCAGCAAGGACGATGCTGGAAACTGCTCTCAAATGACTTCCATATATGGTTCTAAGCTTAGTTCGTGGGTTGAGAATGGTAGTAGTGTGAAACGTGAAAGCAGCGTTTCAACTGGATACTCTAAGAGACCAGAAGAAGTTTGCAAATCAAATAGGAAAAGACTTAAACCTGGAGAGAATCCTAGACCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTTAAAGAATTAAGGGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTTCTGGAGAAGACCATCAAGCATATGCTTTTCCTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACATACAGGGGAATCTAAGATTGTTAGTAAAGAAGGTGGATTGCTATTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCATATGAAGTTGGCTCGCAATCAATGGTTTGTCCTATCATTGTTGAGGATCTTAATCCACCTCGTCAGATGCTAGTAGAGATGCTTTGTGAGGAGCGTGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTAGGTTTAACCATCTTGAAGGGAGTTATGGAAGCTCGTAATGACAAGATCTGGGCACGCTTTGCAGTTGAGGCAAACAGGGATGTGACGAGGATGGAAATATTTATGTCACTGGTTCGTCTTTTGGATCAAACAGTGAAGGGTGGTGCATCATCTTCATCAAATGCAGCTGATAACAACATGATGGTGTATCATTCTTTCCCACAAGCTACCCAGATACCAGCAACTGGTAGGCCTAGTAGTTTGCAATGA	2850	0.4211	MGFLLKEVLRTLCSRNRWSYAVFWKIGCNNSKLLIWEDHYYEPLPSPFPPRTVGMSNFPYRDGEGCWFSSESQLGIQEEDRVGGLINKMIVNNSVSIAGEGIVGRAAFTGNYQWILMNNFSRDAYPPEVYPELHYQFSAGMQTVAVIPVLPHGVVQFGSLLPIMEDIGFVNDVKNLILQLGCVPAALLSEDYSAKVSNERLGVPVTLDPPVDTSNCTPCAANGSSQLTNSTLASRPVAPLPHPPRGEIDNYQDSVLTPQTYDPNQIFDSICQPKAHSMIKINAYGQQKKRVIQAEAKVIPANLDSCMQQHSAYNARSAFNELAGFNQSNLSCSLNYMEQQTSGVGRQNHVNPNMNPSSASNIPQLKTGGGKILEQNLSSGSNSPFGGIPICGGSNLLRTNMINCSVSNSPKVPTSEFSGTHKIGFGLQNNNSTTDAGLCSVPNLCNQTVTSQVNLENSAQNLPNACDAFVSTDQRIHDDLFHAALKIPSLHLDEHEPMGDRIPGFVQDCLNKDVTSQNMVKRNVKHEETYTQLPSGDDLFDVLGVDLKRRLLNGNWDKLLATDSEANRERLDKKAACMNLEGVCPDNSYSVKDAISESGIFSGTGSDHLLDAVVSKAQLAPKQSSDEMSCRTTLTRVSTASVSSPACKQVLSDHVLKGLFDFPKNGAKRAAGETSSPRSGCSKDDAGNCSQMTSIYGSKLSSWVENGSSVKRESSVSTGYSKRPEEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKHTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGASSSSNAADNNMMVYHSFPQATQIPATGRPSSLQ*	950

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac11g01434	949	MobiDBLite	consensus disorder prediction	707	721	-	-
	Phac11g01434	949	MobiDBLite	consensus disorder prediction	725	750	-	-
	Phac11g01434	949	MobiDBLite	consensus disorder prediction	667	686	-	-
	Phac11g01434	949	CDD	bHLH_AtLHW_like	739	808	-	-
	Phac11g01434	949	MobiDBLite	consensus disorder prediction	230	251	-	-
	Phac11g01434	949	Pfam	bHLH-MYC and R2R3-MYB transcription factors N-terminal	5	176	IPR025610	-
	Phac11g01434	949	ProSiteProfiles	Myc-type, basic helix-loop-helix (bHLH) domain profile.	735	784	IPR011598	GO:0046983
	Phac11g01434	949	MobiDBLite	consensus disorder prediction	707	750	-	-
	Phac11g01434	949	PANTHER	TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED	1	943	IPR043561	GO:0003700\|GO:0006355

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac11g01434	Phac-Chr11	11388520	11395303	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac11g01434	537	920	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT2G27230	53.213	8.95e-117	370

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac11g01434	-		-	gmx:100812899	1566.98

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phac5g01766	5	37841583	37847540	Phac11g01434	11	11388520	11395303	PCT

Showing 1 to 1 of 1 entries