Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01429 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGAGGAGCATTTGGAGCTGCTATTCTTGTTCACCACAAGGCTGAGAAGAAGAAATATGTGTTGAAAAAAATCAGGCTTGCAAGACAGACTGAACGATGCAGAAGATCTGCTCATCAAGAAATGGCTCTTATTGCTCGAATCCAGCATCCTTACATTGTGGAATTCAAGGAGGCATGGGTTGAGAAGGGCTGCTATGTCTGCATTGTCACTGGATATTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAATTAAATGGTGCTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAATTACTGTTGGCAGTGGAGTACCTGCATTCAAATTTTGTTTTGCATCGTGACCTGAAGTGTTCCAACATCTTTCTTACCAAGGATCAGGATGTTCGCCTAGGGGATTTTGGCCTTGCTAAGACACTAAAAGCAGATGATTTGGCTTCCTCGGTGGTAGGAACTCCTAATTACATGTGTCCTGAACTGCTTGCTGATATACCATATGGATTCAAATCTGATATTTGGTCACTAGGGTGTTGTATATACGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTTGATATGGCAGGATTGATAAGCAAGATAAACCGTTCTTCCATTGGCCCTTTGCCTCCATGTTATTCCCCTTCCTTGAAAACACTGATAAAGGGCATGCTAAGAAAAAATCCTGAACATCGGCCAACAGCATCTGAGGTGCTTAAGCACCCTTATTTACAGCCTTATGTGGATCAATACCGTCCAGCTTTCAGTCCTCCATCAACCTGTTCTCCTGAAAAATCAATTTCTACTGTCAACTATCCTCGAAAAAACATGGCTGAAAGTCAAAACAGTAATAGTTCCAACAGTGATAAAGATAGTTTGATGTCAAATGAGAAAAACATTGCAACAACATTACCGAAGTGTGATAACAAAGCCACTGAGATGGATCAAACATCTATCGATGATGATGTTTCAGAGGAAGAAAGTGGCCCTGGTAATGCCAATGGCAATACCAAAACAGCTGAGCAAGAGGTGATGAAACCATCTCATAATGCACACCATTCTCATGTTGAATCTAAGCAGCCAAAAACAATTAGAAATATAATGATGGCCTTGAAAGAAGGAAAGGCTAGAGAAGCTACTTCTCCAATGAGAGGCAATCGCATAAAGCCTGGTGGTGTATCAACAACACAGAAAATAAGTACCGAGACACTGTCTAAATTGCCGAAGCCTAATTTTATTGTTCCTATTGTGAAACCTATGTTAGAGTCACCAACTGTTGCACTTGCACGGGCAACCCCTGACTCTGCAAAAAGAATGCAGGGGTCACATCATTCAAAGCAACAGTTTCTGATGGTAGAAGCCTCACCAAAACTTAAAGCTAGACATGATTTGACTCCGCCACCTGCAGTTGTCAAACAAGTAGATGGAGATGTAGTTCCTCCCAAGCCAAGACAAAGAACTCCCCCAAGCTTACTTAGAAGACCTTCATTTTCGGGAAGAATGAGGCTGGCTGGAATTGATGTTCCAAATGCACCAAATGATACTGGAAAGCTAGGCACAGATAAAATAGTTCAGGAACATGAGACGAGCCCTTGTCAGCTGGCCAAAGACAATGTACCAAATTTTTCGAGACAGGTTACTAGAGAGCCCCAGAAGGTTTTTGAAAGAAGTTCCAAAGGAATGCAAACAGACAGCAGCAATTCTGCTTCATCTTCAGTTTCTATCCGAGGTGAACTTGCTGATGATGCTACAACTTTTATTGACATGAGAGAGCAGATGCTTCCTGGAGATGTGAATGTAAGCCACATTGTAGGTGTGGAATCATGTCCTGACAGCAGCCCGTCGACAACTTGTGCACATTGTAAGATGGTTGAAAATGTTCCTAAAGAATCCTGTGAGATTGGCATGAATTTTCACAATACTATAAGTAGTAATGAGAAAGTGAATTCCAGTTTAAGTCTAGATCACCGTGTTGAAGATTCTGAGGTAACACTTGCTTCAGAAGGTGGTCTTCTTAAATCCCAGACAACTATGTCTACTACATTCGGCTGTGATAATGGATCTGTTGATCCCTCTGCTGGAGCCACCAAAGAAATCAAAGATTTTCAAGATATTACCAAGGAAATGCCTTTGGCCAAGAATACCCAACGCGCACCCACAAGTTCTGGAGAAAAGTCTGCTCATGTAGAAGTTAGTCCAGAAAGTGAACCTGATCTATTTGTTCAGCCAGCACCTGGATGTAAGTCCCCTGGTGATGACAAATTCACTGTGAGGGAGCGACTGTCACCTGTGGTTGAAACGGTTCCGCTGGTTACCCCTACTAAATTATCTAGCCAGAAAGTTTTGCAAGAGAAAGGAACTGTGCTGCAGAATCCACCAGAAAGGCCTGATACTGGTCATCTTCCTCCAGCCTTTGACGAAGTTATCCATGTCATACGCCATAGTAGTTACCGTGTTGGCAGCGATCAGCCAGTAAAGGAATCGGTAGAGATGGGAGTTCAAAATGTAGATGTTGGTAAGTTTATCAATGTTGTGAGGGATGATTTAGAAATGAGGAACATAACGTCACCTTTGACACTCAAATCTTCAAGTTGCTCTGATGTTCCAAGCTTGAAATCTGATCAGTTGGAAATGAAAAACTTAAACACTCCTCCCATCCTTAAATCTTCAAGTTTCTCCGATTCTTCCAGCATGAAATCAAGCAATTCTGATCATCCTGGTCTTAAGGAACAAGATGTAAGTAACCCTCCTCCTCTAGTGTCAGAACCTGAATTTACTGAGCTCAGTAAAAGTAACACTCCTATGAATGAAGAGAAACTACCAGCAAAGGAAACATTGGATGTGAAATCTTTCAGACAGAGAGCAGAGGCACTTGAAGAGCTCTTGGAGTTGTCTGCAGAGTTGCTGCAGCAAAACAGATTGGAGGAACTTCAAGTTGTTCTGAAGCCCTTTGGGAAAGATAAGGTCTCCCCAAGGGAGACAGCCATTTGGTTAGCCAAGAGTCTCAAAGGAATGATGTCTGAGGAAAGTGGAGGACGCTCTTCATAA 3102 0.4249 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKLNGAYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLQPYVDQYRPAFSPPSTCSPEKSISTVNYPRKNMAESQNSNSSNSDKDSLMSNEKNIATTLPKCDNKATEMDQTSIDDDVSEEESGPGNANGNTKTAEQEVMKPSHNAHHSHVESKQPKTIRNIMMALKEGKAREATSPMRGNRIKPGGVSTTQKISTETLSKLPKPNFIVPIVKPMLESPTVALARATPDSAKRMQGSHHSKQQFLMVEASPKLKARHDLTPPPAVVKQVDGDVVPPKPRQRTPPSLLRRPSFSGRMRLAGIDVPNAPNDTGKLGTDKIVQEHETSPCQLAKDNVPNFSRQVTREPQKVFERSSKGMQTDSSNSASSSVSIRGELADDATTFIDMREQMLPGDVNVSHIVGVESCPDSSPSTTCAHCKMVENVPKESCEIGMNFHNTISSNEKVNSSLSLDHRVEDSEVTLASEGGLLKSQTTMSTTFGCDNGSVDPSAGATKEIKDFQDITKEMPLAKNTQRAPTSSGEKSAHVEVSPESEPDLFVQPAPGCKSPGDDKFTVRERLSPVVETVPLVTPTKLSSQKVLQEKGTVLQNPPERPDTGHLPPAFDEVIHVIRHSSYRVGSDQPVKESVEMGVQNVDVGKFINVVRDDLEMRNITSPLTLKSSSCSDVPSLKSDQLEMKNLNTPPILKSSSFSDSSSMKSSNSDHPGLKEQDVSNPPPLVSEPEFTELSKSNTPMNEEKLPAKETLDVKSFRQRAEALEELLELSAELLQQNRLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMMSEESGGRSS* 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01429 1033 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Phac11g01429 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Phac11g01429 1033 MobiDBLite consensus disorder prediction 574 593 - -
Phac11g01429 1033 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01429 1033 MobiDBLite consensus disorder prediction 900 962 - -
Phac11g01429 1033 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01429 1033 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01429 1033 FunFam Serine/threonine-protein kinase Nek5 90 335 - -
Phac11g01429 1033 MobiDBLite consensus disorder prediction 731 770 - -
Phac11g01429 1033 Coils Coil 970 996 - -
Phac11g01429 1033 MobiDBLite consensus disorder prediction 900 927 - -
Phac11g01429 1033 FunFam Serine/threonine-protein kinase Nek2 5 87 - -
Phac11g01429 1033 MobiDBLite consensus disorder prediction 320 379 - -
Phac11g01429 1033 CDD STKc_Nek 7 262 - -
Phac11g01429 1033 MobiDBLite consensus disorder prediction 393 415 - -
Phac11g01429 1033 MobiDBLite consensus disorder prediction 363 378 - -
Phac11g01429 1033 MobiDBLite consensus disorder prediction 347 362 - -
Phac11g01429 1033 Gene3D Transferase(Phosphotransferase) domain 1 90 386 - -
Phac11g01429 1033 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 981 - -
Phac11g01429 1033 MobiDBLite consensus disorder prediction 731 746 - -
Phac11g01429 1033 SUPERFAMILY Protein kinase-like (PK-like) 4 311 IPR011009 -
Phac11g01429 1033 MobiDBLite consensus disorder prediction 485 513 - -
Phac11g01429 1033 MobiDBLite consensus disorder prediction 566 593 - -
Phac11g01429 1033 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01429 Phac-Chr11 11286644 11296763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01429 14 263 MAP Kinase Kinase Kinase AT1G53570 31.765 9.12e-37 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Phac11g01429 Pkinase 7.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01429 K08857 - gmx:100818747 1656.34