Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01398 ATGCTATTTGTTCGAGTTTTGTGCATGATTCACTCATTTTTTGTAAAATGGTTGTTTGCAGCGCTTGCTGGGGAGCTTTGTCGTGGGGATACAGAGCAATGGTTTTTCTTTTCACCAGGGCAAGAGAGAGAAGCCAGAGGAGGGAGGCCTAGCAGAACAACAGCTTGTGGGTACTGGAAAGCTACTGGTTCCCCTGGCTATGTTTATTCTTCAGATAACAGAGTCATTGGGGTGAAGAAATCCATGGTCTTCTACAAAGGAAAAGCCCCTATGGGAAGAAAAACCAAATGGAAAATGAATGAGTACAAAGCTATCTCAGTTCCTCACCAATCCAACTCTGTCATCCCTGAGTTGAGATGCGAATTCAGCTTATATCGGGTATATATTGTATCTGGAACCTTTCGAGCATTTGATCGACGTCCATCAGAGAGTGAAGGAACAGAGTCACGTGTTCATCAAAGTTCATCTCAAATTTCTCAGTTCCCAGAAGGTGGAGATTCAAGTAGCACAAATTGGAACCAGGTTCAGCTCCAAGAACCCTTATGGGAATTGGAATGGGAACACTTTAATTGGGTCTGA 579 0.4352 MLFVRVLCMIHSFFVKWLFAALAGELCRGDTEQWFFFSPGQEREARGGRPSRTTACGYWKATGSPGYVYSSDNRVIGVKKSMVFYKGKAPMGRKTKWKMNEYKAISVPHQSNSVIPELRCEFSLYRVYIVSGTFRAFDRRPSESEGTESRVHQSSSQISQFPEGGDSSSTNWNQVQLQEPLWELEWEHFNWV* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01398 192 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 26 149 - -
Phac11g01398 192 Pfam No apical meristem (NAM) protein 27 103 IPR003441 GO:0003677|GO:0006355
Phac11g01398 192 SUPERFAMILY NAC domain 25 128 IPR036093 GO:0003677|GO:0006355
Phac11g01398 192 ProSiteProfiles NAC domain profile. 1 130 IPR003441 GO:0003677|GO:0006355
Phac11g01398 192 Gene3D NAC domain 14 132 IPR036093 GO:0003677|GO:0006355
Phac11g01398 192 MobiDBLite consensus disorder prediction 148 171 - -
Phac11g01398 192 MobiDBLite consensus disorder prediction 139 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01398 Phac-Chr11 10770845 10772242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01398 22 191 NAC Transcription Factor Family AT3G44350 56.701 1.77e-65 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac11g01398 NAM 1.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01398 - - gmx:100808618 271.937