Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01397 ATGATAAACATCATGGAAGATCATCCACCTGGTTTCCGGTTCTTCCCAACAGAAGAAGAGCTTGTTGGGTTCTACCTGCACAACAAGCTAGAAGGTTTAAGAAATGCTGCTGCCATAGATAGAGTTATCCCAGTTGTTGATATCAATGCTCTGGAGCCCTGGAACCTCCCATCGCTTGCTGGGGAGCTTTGTCGTGGGGATACAGAGCAATGGTTTTTCTTTTCACCAGGGCAAGAGAGAGAAGCCAGAGGAGGGAGGCCTAGCAGAACAACAGCTTGTGGGTACTGGAAAGCTACTGGTTCCCCTGGCTATGTTTATTCTTCAGATAACAGAGTCATTGGGGTGAAGAAATCCATGGTCTTCTACAAAGGAAAAGCCCCTATGGGAAGAAAAACCAAATGGAAAATGAATGAGTACAAAGCTATCTCAGTTCCTCACCAATCCAACTCTGTCATCCCTGAGTTGAGATGCGAATTCAGCTTATATCGGGTATATATTGTATCTGGAACCTTTCGAGCATTTGATCGACGTCCATCAGAGAGTGAAGGAACAGAGTCACGTGTTCATCAAAGTTCATCTCAAATTTCTCAGTTCCCAGAAGGTGGAGATTCAAGTAGCACAAATTGGAACCAGGTTCAGCTCCAAGAACCCTTATGGGAATTGGAATGGGAACACTTTAATTGGGTCTGA 690 0.4478 MINIMEDHPPGFRFFPTEEELVGFYLHNKLEGLRNAAAIDRVIPVVDINALEPWNLPSLAGELCRGDTEQWFFFSPGQEREARGGRPSRTTACGYWKATGSPGYVYSSDNRVIGVKKSMVFYKGKAPMGRKTKWKMNEYKAISVPHQSNSVIPELRCEFSLYRVYIVSGTFRAFDRRPSESEGTESRVHQSSSQISQFPEGGDSSSTNWNQVQLQEPLWELEWEHFNWV* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01397 229 Gene3D NAC domain 17 169 IPR036093 GO:0003677|GO:0006355
Phac11g01397 229 MobiDBLite consensus disorder prediction 176 208 - -
Phac11g01397 229 SUPERFAMILY NAC domain 5 165 IPR036093 GO:0003677|GO:0006355
Phac11g01397 229 MobiDBLite consensus disorder prediction 185 208 - -
Phac11g01397 229 Pfam No apical meristem (NAM) protein 9 140 IPR003441 GO:0003677|GO:0006355
Phac11g01397 229 ProSiteProfiles NAC domain profile. 8 167 IPR003441 GO:0003677|GO:0006355
Phac11g01397 229 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01397 Phac-Chr11 10770845 10772242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01397 6 228 NAC Transcription Factor Family AT3G44350 53.846 2.22e-81 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac11g01397 NAM 1.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01397 - - gmx:100781321 371.318