Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01385 ATGGCTGAGGCGGAGGAGCTGCCCCGGACTATCGTGCGCCGTGTTGTGAAGGATAAACTGTCCCGTTGCTCTGAAGAAGGAGAAGTTTCCGTCAGCAAAGATGGTCTTCTGGCATTCTCAGAAAGCGGTAGGATTTTCATCCACTACCTTTCCGCCACGGCCAATGACATATGTAAGGAGTCAAAGAGACAGATTATCACTGCAGAGGATGTTTTCAAAGCTCTTGAAGAAACCGAGTTCTCTGAGTTTGTTCGTCCTTTAAAAGCTTCCCTTGAAGAGTTTAGGAAGAAGAATGTTGGAAAGAAAGCGGCACTGTCAAAGGGAAAAGAAGATGAGTCGAGAAAGAAAAGGAAATTGGAAGCTGAGTCATCTGATAAGGGTGAGGCTTCCAATAATGACGAGTCATCTGATAAAGGGGAGGGTTCTGATAAAGGTGAGGGCGAGGACAATGAATGA 456 0.4605 MAEAEELPRTIVRRVVKDKLSRCSEEGEVSVSKDGLLAFSESGRIFIHYLSATANDICKESKRQIITAEDVFKALEETEFSEFVRPLKASLEEFRKKNVGKKAALSKGKEDESRKKRKLEAESSDKGEASNNDESSDKGEGSDKGEGEDNE* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01385 151 MobiDBLite consensus disorder prediction 99 151 - -
Phac11g01385 151 FunFam DNA polymerase epsilon subunit 3 1 140 - -
Phac11g01385 151 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 75 IPR003958 -
Phac11g01385 151 Coils Coil 102 122 - -
Phac11g01385 151 SUPERFAMILY Histone-fold 7 122 IPR009072 GO:0046982
Phac11g01385 151 Gene3D Histone, subunit A 1 148 IPR009072 GO:0046982
Phac11g01385 151 Coils Coil 58 78 - -
Phac11g01385 151 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 4 141 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01385 7 95 CCAAT-HAP3 Transcription Factor Family AT4G14540 30.337 7.62e-09 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac11g01385 CBFD_NFYB_HMF 7.1e-07 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01385 K02326 - gmx:100306382 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g01385 11 10616945 10619053 Phac11g01385 11 10616945 10619053 ECH