Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01377 ATGTACACTCATCTCCAACATCAAGGAAAGAACATCCATTCTTCTTCCAGAATGCCAATCCCTTCTGAGAGACATATGTTCCTTCACACGGGAAATGGATCTGGTGATTCTGGACTTGTTCTCTCAACTGATGCTAAGCCTAGATTGAAATGGACACCTGATCTTCATGCCAGGTTTATAGAAGCTGTGCAGCAGTTAGGGGGAGCTGACAAGGCAACTCCCAAAACGGTAATGAAACTCATGGGGATTTCAGGTCTTACTTTGTATCATCTGAAGAGTCATCTTCAGAAGTACAGATTGAGCAAGAGTCTGCATGGACAAAGTAATAACGCGACACACAAAATCTGCATAAACCCAGGTGCAGCAACAGACGAAAGACTCAGAGAAAACAATGGAACGCATGTGAACAATTTAAACCTTGCCCCTCAGTCTAATAACAAAGATTTACACATAAGCGAGGCACTGCAGATGCAAATAGAGGTTCAAAGAAGACTAAATGAGCAACTTGAGGTGCAAAGACTTCTGCAGCTCCGGATAGAGGCTCAAGGAAAGTACCTTCAAGCTGTGCTAGAGAAGGCTCAGGAAACACTTGGTAGACAAAATTTGGGAGTAGTAGGACTTGAAGCTGCCAAACTTCAACTTTCAGATCTAGTGTCCAAAGTGTCCTCTCAGTGTCTGAATTCAGCATTTTTAGAGATGAAGGAGTTGCAAGGATTTAGCCCTCACCAAACACAAACCAACCAGCCAAATGACTGTTCTATGGACAGTTGCCTCACATCTTGTGAGGTGTCCCAAAAAGAGCAAGAGATACAAAATGGGGGGATGAGCTTAAGACCCTTCAATGTCCACACATTCATGGAACGAAAGGAGGTTATAGAGGGTCCCAATCTTAACAACCTACCAAACACTGACCTCAAATGGTGTGATCCAGTGAAGAACACCTTCCTTACCCCATTGAGCAGAAGAAGTCCAAGTAACTTGTCTATGAGCATTGGACTTGAAGGAGAAACTGAGAATGGAAGCACCATTAGGAAAGAATCAGTGAAACCAGTGGCTGAGAAAGTTTCTCAAGATTATGGACTGCCTTCATTCTTTGCTGCACCAAAACTGGACCTAACCACTGAAGATAAGAACACTAGAAAGAGTTGTAAAGAACTGGACTTGAATGGATTCAGTTGGAACTAA 1185 0.4304 MYTHLQHQGKNIHSSSRMPIPSERHMFLHTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKSLHGQSNNATHKICINPGAATDERLRENNGTHVNNLNLAPQSNNKDLHISEALQMQIEVQRRLNEQLEVQRLLQLRIEAQGKYLQAVLEKAQETLGRQNLGVVGLEAAKLQLSDLVSKVSSQCLNSAFLEMKELQGFSPHQTQTNQPNDCSMDSCLTSCEVSQKEQEIQNGGMSLRPFNVHTFMERKEVIEGPNLNNLPNTDLKWCDPVKNTFLTPLSRRSPSNLSMSIGLEGETENGSTIRKESVKPVAEKVSQDYGLPSFFAAPKLDLTTEDKNTRKSCKELDLNGFSWN* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01377 394 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Phac11g01377 394 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 277 IPR044848 GO:0003700
Phac11g01377 394 MobiDBLite consensus disorder prediction 327 346 - -
Phac11g01377 394 FunFam Myb family transcription factor 45 103 - -
Phac11g01377 394 Pfam MYB-CC type transfactor, LHEQLE motif 150 196 IPR025756 -
Phac11g01377 394 Gene3D - 45 103 - -
Phac11g01377 394 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Phac11g01377 394 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
Phac11g01377 394 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Phac11g01377 394 Coils Coil 152 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01377 Phac-Chr11 10579413 10582575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01377 78 394 G2-like Transcription Factor Family AT3G04030 50.301 7.58e-88 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac11g01377 Myb_DNA-binding 2.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01377 - - gmx:100805237 681.019