Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01369 ATGAATTTGATTAAAGAATACAATTCTAACTTTTATGACCTATTTTATGAGACTTTGAAACTCCACAAGCTTAGAGAGACTGACACAACTCACAAGCTTTGCATGGCGGGCCAAAGAGTTGGAGAAACGGGTCTGTCTGAGTCAGGACCTTCAAGTCACCATGTCCCTTATGGAGTTCTTCATGGGATTAATACCTCAGCATCAGGGCTAATGAATCAAGGGTCTGCTTTTGATTTTGGAGAGCTGGAAGAGGCTTTTGGTCTGTCAGGAATTAAGATAAGAAGTGATGAAGCCAAATCATCAGCTTTATTCACAGGCAGGCCTTCAGCCACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCAGCAAACCCCAAGAGGAGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGATCAGGAGTGAACACTCTTTCAAGCAAAACTGAGCTCCAATTTGAAACAGAATCTCCCATAAGCATAAAAGCATCTTCTTCAGATCATCAACAGGCTTTTGATCAGCTTCAACAACAACAGGAGACAGCAGCTGATGCCTCAAGAGCAGGCACATCACAGACTCAATCAGCAGCCAAATCACCACAAGAAAAGAGGAAAGGAGCTGCTGGTTCCACATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGATTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAGTCAAGTAGATTAAAGCTCACACATCTTGAACAAGACCTTCAAAGAGCTCGCTCTCAGGGAGTGTTTATGGGTTGTGGTGGTGCTGGTGGAAGTATAAGTTCTGGAGCTGCAATGTTTGACATGGAGTATGCAAGATGGTTAGAAGATGACCACCGGCACATGGCGGAGCTCCGGACAGGACTGCAGGCGCCGCTCTCAGACGGCGAGCTAAGAGTGATTGTGGATGGATATCTGTCTCATTATGATGAGGTTTTCAGGCTGAAGGGGGTGGCTGCTAAAACAGATGTGTTTCATCTTATCAATGGCATGTGGACTTCACCAGCTGAGAGATGCTTCCTCTGGATAGGTGGTTTTAGACCATCAGAACTCATCACAATGTTGATGCAACAGTTGGAGCCCCTAGCTGAGCAGCAATTCATGGGCATATGTGGGCTCCGCCATTCTTCAATGCAAGCAGAAGAGGCTCTCACTCAAGGTCTTGAACAGCTTCAGCAGTCTCTCGTCGACACCATCGCCGGCGGCTCCCTCGCCGACGGCGTGCAACAGATGGTGGCGGCCATGGCCAAGCTTGCCAACCTTGAAGGATTTGTTGGCCAGGCTGATAATTTGAGACAACAAACCCTTCACCAGTTATGTCGATTACTGACAGTTCGACAAGCAGCAAGATGTTTTGTTGTGATTGGAGAGTATTATGGCCGTCTAAGAGCCCTAAGTTCTCTTTGGGCATCAAGACCACGAGAGAGCTTGATGAGTGATGATAACTCATGCCAAACAACAACGGAATTGCAAATGGTTCAACCTTCTCAGAATCAGTTCTCGAATTTCTGA 1569 0.4659 MNLIKEYNSNFYDLFYETLKLHKLRETDTTHKLCMAGQRVGETGLSESGPSSHHVPYGVLHGINTSASGLMNQGSAFDFGELEEAFGLSGIKIRSDEAKSSALFTGRPSATLEMFPSWPMRFQQTPRGGSKSGGESTDSGSGVNTLSSKTELQFETESPISIKASSSDHQQAFDQLQQQQETAADASRAGTSQTQSAAKSPQEKRKGAAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTHLEQDLQRARSQGVFMGCGGAGGSISSGAAMFDMEYARWLEDDHRHMAELRTGLQAPLSDGELRVIVDGYLSHYDEVFRLKGVAAKTDVFHLINGMWTSPAERCFLWIGGFRPSELITMLMQQLEPLAEQQFMGICGLRHSSMQAEEALTQGLEQLQQSLVDTIAGGSLADGVQQMVAAMAKLANLEGFVGQADNLRQQTLHQLCRLLTVRQAARCFVVIGEYYGRLRALSSLWASRPRESLMSDDNSCQTTTELQMVQPSQNQFSNF* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01369 522 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 218 262 IPR004827 GO:0003700|GO:0006355
Phac11g01369 522 Pfam Seed dormancy control 300 375 IPR025422 GO:0006351|GO:0043565
Phac11g01369 522 Coils Coil 246 266 - -
Phac11g01369 522 PANTHER TRANSCRIPTION FACTOR TGA9 159 494 - -
Phac11g01369 522 SMART brlzneu 216 292 IPR004827 GO:0003700|GO:0006355
Phac11g01369 522 Pfam bZIP transcription factor 219 261 IPR004827 GO:0003700|GO:0006355
Phac11g01369 522 ProSiteProfiles DOG1 domain profile. 283 491 IPR025422 GO:0006351|GO:0043565
Phac11g01369 522 Gene3D - 219 267 - -
Phac11g01369 522 MobiDBLite consensus disorder prediction 115 222 - -
Phac11g01369 522 FunFam BZIP family transcription factor 219 268 - -
Phac11g01369 522 SUPERFAMILY Leucine zipper domain 220 262 IPR046347 GO:0003700|GO:0006355
Phac11g01369 522 MobiDBLite consensus disorder prediction 123 201 - -
Phac11g01369 522 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 223 238 IPR004827 GO:0003700|GO:0006355
Phac11g01369 522 CDD bZIP_HBP1b-like 220 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01369 Phac-Chr11 10461858 10470047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01369 191 522 bZIP Transcription Factor Family AT1G08320 72.372 2.42e-179 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac11g01369 DOG1 6.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01369 K14431 - gmx:100101904 808.135