Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01345 ATGGCAAAGAAAAGTGACTACTATGCTTTAAAGACACAGATTGAATCAGAGTTTGTTGATGATTCTGAGAACAACAAATCCTCATCCCGCTATTCTGAGAAGAGGTCATCAAAATCTTTTCTTGACCTTCCCAAGACCGAGCAACAATCAAGACTGAAAGATCGTTTAAAGAAATACTGTCAGAAGGCATATAAGCGGGTACTCAACAAACCTGTAACTGAAGTTCGTGAAGCGGGAATCTGCATGCGTGAAAATCCGTTTTATGTTGATACTGTTCGCAGTTTCCGGGATAGAAGATACGAATATAAAGGTCTCAATAAGGTTTGGAAGGGAAAATTGTCAGAGGCCAAGGCTAGTGGAAATTCTATGAAGATCCAAGAAGCACAGGATATGGTTGTGCTCTATGATTCATTGCAACTTGCTCACAAGTGTATACTTAATTCCTTTTATGGATATGTCATGCGCAAGGGTGCAAGATGGTATTCCATGGAAATGGCTGGAGTAGTGACATATACTGGTGCAAAAATAATCCAGAATGCTCGCTTGCTTGTAGAAAAAATAGGAAAACCACTTGAACTAGACACGGATGGTATTTGGTGTGCACTACCGGGATCCTTTCCGGAAAATTTTACTTTTAAAACAGAAGATTCAAAGAAGAAGTTTACAATATCATACCCTTGTGTTATGCTTAACGTTGATGTGGCAATAAATAATACAAATGATCAATATCAGACACTCACAGATCCAATGAGGAAAACTTATACAACTCATAGTGAATGCTCTATTGAATTTGAGGTGGATGGACCATATAAGGCAATGATCCTTCCTGCTTCCAAGGAAGAAGGAATTTTAATTAAAAAGCGATATGCTGTTTTTAATGATGATGGAACCCTTGCAGAACTTAAAGGTTTTGAGATCAAGCGCAGAGGTGAATTGAAGCTAATCAAAGTTTTCCAGGCTGAACTTTTTGACAAGTTTCTCCATGGTTCAACATTAGAAGAATGCTATTCAGCTGTTGCTTCAGTGGCAAACCGCTGGCTTGATCTTCTTGATAACCAGGGAAAGGATATAGCAGACAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAATCTTTAGCTGATTATGGTGAGCAGAAGTCTTGTGCTGTTACCACTGCTAGACGTCTAGCTGACTTTCTTGGAGATACAATGGTCAAAGATAAAGGTCTTCGATGTCAGTACATAGTTGCAAGTGAACCAAAGGGCACACCAGTTAGTGAGCGTGCTATTCCTGTGGCAATATTTGAAACTGATGCTGAGGTAATGAAGTTCTATATCCGCAAATGGTGCAAGGTCTCGTGTGAAGTTGCCATTCGTTCGATAATTGATTGGTCCTATTACAAGCAGCGGCTTAGTTCTGCAATTCAAAAAATTGTTACTATTCCTGCTGCAATGCAAAAGGTTTCAAATCCTGTCCCTAGGGTAGTTCATCCTGATTGGTTGCACAAGAAAGTTCGTGAGAAGGAGGACAGGTTTCGCCAACGGAAATTAGTTGATGTCTTTAAATCAATGAACAGGAATGAGCAGTCAAAAAAGCATAATGACTCAAATCGTGTCCCTCTTGTGATGGATGATGAGATTCTTAATGAGTTAGAGGACTTTGGAAACAAGAGTAGGAGTTCTACGCGCGGACCTAGACCAATTATAAGGCATTATGAAGCTAATAATGAACAAAATTCAAGGAAGCTCAGTGATCAACAAGATATGGAGCAAGAGCATAGTAAAGATAATAGCAGCAAGAAAAATGTACTTTCACCATTACAACAAAATGAAACATGTGAAAATGTAGACAGAACTGTTGATTATCAGGGATGGCTTCAAGTAAAGAAGCGAATGTGGAAAAATATCCTGGAAAGGAGAAAGAAGCAAAGATTGGAGAAATCAAAGACATCTAATCGTGTAAATGGTGTTTCTGAACAAGTGAGTGGTAAGAGGAATCCTGGCAGAAGTCATGTCAGTTCGTATCTTAAAAGGCTTGAGGTAGACTTAACGAAGTGTCACTGGCAGATAATACAACTAGTTCCCAGTTCACTGATAGGCCAATTTTTTGCTTGGGTTGTTGTCGATGGGAGTATGCATAAGATTCCTGTTTCTGTTCCTAGAGTCTTTTACCTCAATTCAAGATCCCCAATTAATGAAGAATTTATTGGTAAACGTGTTAACAAGACTCTTCCTCATGGAAGGCATAGTTATAACTTATATGAGGTCTCAATTAATGAAATTCAATATGGGGAAGTAAGCAAAAAACTTGCAACTCTTCTAGCGGATCCTGATGTTGAGGGAATATATGAAACTAAGGTGCCACTGGAGTTTAATGCAATAGTCCAGCTTGGTTGCGTATGTAAGGTGGACAAAACTGCTAATAAACGTAGTCTACAAGAACCATGGAATTTGAGTGAATTGCACATGAAGACCACGACAGAATGTGTTTATCTTGAACAATCTTTATCCTTCTTTTATTTGTACCACAGCATCTCTGAGGGGCGGGCTATATATGTTGGATATTTTCCTGCATCAAAAGCAATATCTGTTGTGGTGGTTAATCCCTATCAAAACAAAGATTTATCTCCGAATTTTCTTGAAAGACAATTTCATGATGCTTGCCAGACGTTGTCTATTGAGCCACCTCTGAGGAATGACATTAATTTTAAGGTGGACTATGTCGCACATGTCAAGGACGCTGAAACAGTGATGCAAAGAGCAATAAATGGTCACAGTCATGGGAGGGAAAATCATGTGCCTGTGGTTGCTGTCATTGAATGCCCAAATGTTCAATTAGTAAAATTGGGTATCCGAGCTCTGGATGATTTTCCATGCCTGAGTATTCCTTATAATGCACGTGATAGTCAGTACCAGATTCTTGGATGGCAACAAACTGCTGGTAAAGTTGGAATGCAACGCTGTGCTGCATCGGTCCAATGGTTAAATCAAAGAATTGCTCTCTCAAGATATGCCCATGTACCGCCAGGGAACTTTGAACTTGACTGGCTCATATTTATGGCAGATATCTTCTTTTCAAGAGCATTGCATGATAATCAACAGGTGCTTTGGATATCTGATGATGGCCTTCCAGATTTAGGTGGGATTAATGACGAACATAGCTGTTTTATTGACGAGGTCCAACAACCTGTTCTTACTTATCCTGGAGCTTACAGAAACGTAACTGTGGAGTTAAAGATACACCACCTGGCTGTAAATGCTCTACTCAAATACAGCCTAGTTAATGAAATGGAAGGAGGCACTCTATTAGGATTTGGTCATGAACATGATTCTGGAGCATTTTCAATGAATGATCAGAATGGTTTTGACGAGTCTACCTCTTGTGCACACGCCTTTCGAGTTCTTAAGCAGTTGATCCAGCGGTGCCTAACAGACACAGTGACATCAGGAAATGTTTACGCTGATTCAATTTTGCAGCATCTATATAGATGGCTTTGCAGCCCTAAATCAAAACTTCATGATCCCGCTCTCCACCAGCTACTCCACAAGGTCATGCAAAAGGTTTTCGCGTTGTTGTTGGCAGAGTTCCGCAAGTTAGGTGCTACAATTGTATTTGCAAACTTCACGAAGATTATTATAGACACAGGGAAATATGATCTGTCTAGAGCCAAAGCTTACTGCGACAGTTTGTTAAGAACTATCCAATCTAGAGATCTATTTGAATGGATTGAGCTTGAACCACTGCAGTTCTGGTGCTCGTTGCTATTCATGGATCAGTATAACTATGGTGGTATACCAGCAAAATCTGATGAAGCCATGAATGATAAATCCCAAGTAGACATCATATCTAGCTGGAATATTGCTGAATACTTGCCAAAAAAAGTCCAAGACCATTTTGTTTACATCGTTTCCGAATTCATGTATATTCCCTGGAATTATGCACAAAACCAAGCACAAATCAGGGCCTCATTGCAGGATGGTGACACCTGTACTCCATCAATAAGCATTGGAACTGCAGTAGCTTTTGAATCAGAAATAACAGAATATATCAAAGGACAGATTAGCTCTTACTTCGCCGACAAACTGCTAGGAATTGTTCACCATATTGGTCTTCATATGAAGCGAGTGAGCAGATCAGAAAACAACCAGAGTATTTCACCAGGCCCTGAATTACACAGAGGGGATGCTGCCTTGGAATTTATCAAGCATGTCTGTGCTGTCCTGGCCCTTGACCAAAGTGTGCAGCATGAAGTTTTGGTCTTGAGAAGGAATTTGCTCAAATATGTTGATGTCAAAGAGTTTGCTCCAGAAGCCGAGTTTCATGATCCTTGTCATTCCTTCGTCTTATCCAATGTCATATGCAGCTATTGTAATGACTGCAGAGACTTGAACTTGTGCCCGGATTCCGTTTCATTAACTGAGGAGTGGCGTTGTGCAGTGCCACAGTGTGGCCAGCCTTATGACCGTGAGGTGATGGAAAATGCTCTTCTTCAGATTGTAAGACAAAGAGAACGACTATACCACCTGCAAGATCTGGTGTGTATCAGGTGCCATCAGGTGAAAGCTGCACATTTGGCAGAGCAATGTGCATGTGCAGGCTCGTTTAGGTGCAAGGAAGATGCAAATGAATTTCGTAAAAAGATGCAGCTTTTTTTTAACATAGCATCTCGTCAGAAATTCCAGCTTCTCCAAGAATGTACCTCTTGGATTTTAGAACACAGTTTAAATTGA 4722 0.4015 MAKKSDYYALKTQIESEFVDDSENNKSSSRYSEKRSSKSFLDLPKTEQQSRLKDRLKKYCQKAYKRVLNKPVTEVREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTEDSKKKFTISYPCVMLNVDVAINNTNDQYQTLTDPMRKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAIPVAIFETDAEVMKFYIRKWCKVSCEVAIRSIIDWSYYKQRLSSAIQKIVTIPAAMQKVSNPVPRVVHPDWLHKKVREKEDRFRQRKLVDVFKSMNRNEQSKKHNDSNRVPLVMDDEILNELEDFGNKSRSSTRGPRPIIRHYEANNEQNSRKLSDQQDMEQEHSKDNSSKKNVLSPLQQNETCENVDRTVDYQGWLQVKKRMWKNILERRKKQRLEKSKTSNRVNGVSEQVSGKRNPGRSHVSSYLKRLEVDLTKCHWQIIQLVPSSLIGQFFAWVVVDGSMHKIPVSVPRVFYLNSRSPINEEFIGKRVNKTLPHGRHSYNLYEVSINEIQYGEVSKKLATLLADPDVEGIYETKVPLEFNAIVQLGCVCKVDKTANKRSLQEPWNLSELHMKTTTECVYLEQSLSFFYLYHSISEGRAIYVGYFPASKAISVVVVNPYQNKDLSPNFLERQFHDACQTLSIEPPLRNDINFKVDYVAHVKDAETVMQRAINGHSHGRENHVPVVAVIECPNVQLVKLGIRALDDFPCLSIPYNARDSQYQILGWQQTAGKVGMQRCAASVQWLNQRIALSRYAHVPPGNFELDWLIFMADIFFSRALHDNQQVLWISDDGLPDLGGINDEHSCFIDEVQQPVLTYPGAYRNVTVELKIHHLAVNALLKYSLVNEMEGGTLLGFGHEHDSGAFSMNDQNGFDESTSCAHAFRVLKQLIQRCLTDTVTSGNVYADSILQHLYRWLCSPKSKLHDPALHQLLHKVMQKVFALLLAEFRKLGATIVFANFTKIIIDTGKYDLSRAKAYCDSLLRTIQSRDLFEWIELEPLQFWCSLLFMDQYNYGGIPAKSDEAMNDKSQVDIISSWNIAEYLPKKVQDHFVYIVSEFMYIPWNYAQNQAQIRASLQDGDTCTPSISIGTAVAFESEITEYIKGQISSYFADKLLGIVHHIGLHMKRVSRSENNQSISPGPELHRGDAALEFIKHVCAVLALDQSVQHEVLVLRRNLLKYVDVKEFAPEAEFHDPCHSFVLSNVICSYCNDCRDLNLCPDSVSLTEEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCHQVKAAHLAEQCACAGSFRCKEDANEFRKKMQLFFNIASRQKFQLLQECTSWILEHSLN* 1574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01345 1573 MobiDBLite consensus disorder prediction 550 607 - -
Phac11g01345 1573 MobiDBLite consensus disorder prediction 19 44 - -
Phac11g01345 1573 Pfam DNA polymerase family B 117 432 IPR006134 GO:0000166|GO:0003677
Phac11g01345 1573 SMART DUF1744_2 876 1262 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Phac11g01345 1573 Gene3D Palm domain of DNA polymerase 117 299 IPR023211 -
Phac11g01345 1573 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 1 1570 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Phac11g01345 1573 Gene3D - 303 487 IPR042087 -
Phac11g01345 1573 FunFam DNA polymerase epsilon catalytic subunit 303 487 - -
Phac11g01345 1573 MobiDBLite consensus disorder prediction 572 596 - -
Phac11g01345 1573 MobiDBLite consensus disorder prediction 647 666 - -
Phac11g01345 1573 FunFam DNA polymerase epsilon catalytic subunit 85 160 - -
Phac11g01345 1573 SUPERFAMILY DNA/RNA polymerases 47 477 IPR043502 -
Phac11g01345 1573 MobiDBLite consensus disorder prediction 639 666 - -
Phac11g01345 1573 FunFam DNA polymerase epsilon catalytic subunit 114 299 - -
Phac11g01345 1573 Pfam Domain of unknown function (DUF1744) 894 1262 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01345 Phac-Chr11 10071059 10086020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01345 2 1568 Core DNA Replication Machinery Family AT2G27120 61.671 0.0 1935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01345 K02324 - gmx:100812003 2838.52