Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01340 ATGGCGTCAGAGAGCACAGTGACTTCAAACTCCACCGATGGTGAACGACCAAAGGTGGTTGTCATAATGGGACCCACAGCTTCCGGAAAGTCTAAGCTTGCGGTTGATTTAGCTTCTCACTTCCCTGTCGAAGTCATCAACGCTGATTCCATGCAGGTCTACCGCGGCCTCGATGTTCTCTCCAACAAACTCCCTCTCTCTCACCAAAACGGAGTGCCGCATCATCTCTTGGGCACTGTAAGCCCCAACGTGGAATTCACGGCTAAAGCGTTTCGGGATTCCGCTATTCCCATTATTGATGACATATTGGCTCGCAATCGTTTGCCTGTTGTAGTTGGAGGTACAAATTACTATATCCAGGCTCTTGTGAGTCCGTTTCTTCTAGATGATTCTGCAGAAGATATGGAAGAAAGCTGTTTGGGTGACCCACCTGGCATCACGCAGTCTGAGAACAGTTTCCCTGCCGAAAATGATGGTTCAAGCTATGGTTATGATCTGCTCAAGGATATCGATCCAGTTGCTGCTAATAGAATCCATCCAAATAACCATAGAAAGATAAATCAATATATTAGTTTGTACACTCGCACTGGTGTTCCTCCTAGTAAAGTTTTTCAAGGGAAGGCAGCAGAGAATTGGGGTCAAGTTGATAACTTAAGATATGATTGTTGCTTTGTATGTGTGGATGCATCTCTCCCTGTACTGGACAGATATGTAGAGCAGAGGGTAGATTGCATGATGGAAGATGGATTACTCAATGAAGTCTATGACATTTATAATTTGAATGCAGATTATACTAGAGGTTTGCGACAGGCCATTGGTGTCCGTGAATTTGAGCCTCTTCTTAGAACTTGTGTTGTCAAAGACATGTATGAAAGAGAGAGGGAATTGACTGAAGGATCCAGCATAGAAAAGGGCAAGACGTTGTTTAATGGTAATTTGGTGGAGTTGGTGAGATCTTCCTCTGATACTGAATCCACAATTCTTTTGGAAGAAGCAATTGAAAAAGTAAAGGTTAATACCAGGAGACTTGTTCGCCGACAGAAGAGGATGCTCAGTCGACTGCAAACATTGTTTGGTTGGAACATACACTTTGTTGATTCCACAGCACCAATATCAAGCAAATCAGAAGATGTATGGGCACGCCAAGTAGTTGAATCTGCTGTGAAGATAGTTAAATCTTTCTTGAGTGGGAACGGAAGCTTCTCATCCACCTTTGGGACTTCAAATGACACAGGGATGAAAATAATCCAAAGGGACCTCTGGACTCAATACGTGTGCAAGGGAGTGTGGTGA 1293 0.4377 MASESTVTSNSTDGERPKVVVIMGPTASGKSKLAVDLASHFPVEVINADSMQVYRGLDVLSNKLPLSHQNGVPHHLLGTVSPNVEFTAKAFRDSAIPIIDDILARNRLPVVVGGTNYYIQALVSPFLLDDSAEDMEESCLGDPPGITQSENSFPAENDGSSYGYDLLKDIDPVAANRIHPNNHRKINQYISLYTRTGVPPSKVFQGKAAENWGQVDNLRYDCCFVCVDASLPVLDRYVEQRVDCMMEDGLLNEVYDIYNLNADYTRGLRQAIGVREFEPLLRTCVVKDMYERERELTEGSSIEKGKTLFNGNLVELVRSSSDTESTILLEEAIEKVKVNTRRLVRRQKRMLSRLQTLFGWNIHFVDSTAPISSKSEDVWARQVVESAVKIVKSFLSGNGSFSSTFGTSNDTGMKIIQRDLWTQYVCKGVW* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01340 430 Hamap tRNA dimethylallyltransferase [miaA]. 19 389 IPR018022 GO:0008033
Phac11g01340 430 Pfam IPP transferase 52 349 - -
Phac11g01340 430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 261 IPR027417 -
Phac11g01340 430 Gene3D - 17 417 IPR027417 -
Phac11g01340 430 Gene3D - 145 207 - -
Phac11g01340 430 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 19 292 IPR018022 GO:0008033
Phac11g01340 430 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 17 395 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01340 Phac-Chr11 10044412 10048201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01340 22 428 C2H2 Transcription Factor Family AT2G27760 56.829 8.91e-158 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01340 K00791 - gmx:100792690 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g01340 11 10044412 10048201 Phac11g01340 11 10044412 10048201 ECH