Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01339 ATGGCGTCAGAGAGCACAGTGACTTCAAACTCCACCGATGGTGAACGACCAAAGGTGGTTGTCATAATGGGACCCACAGCTTCCGGAAAGTCTAAGCTTGCGGTTGATTTAGCTTCTCACTTCCCTGTCGAAGTCATCAACGCTGATTCCATGCAGGTCTACCGCGGCCTCGATGTTCTCTCCAACAAACTCCCTCTCTCTCACCAAAACGGAGTGCCGCATCATCTCTTGGGCACTGTAAGCCCCAACGTGGAATTCACGGCTAAAGCGTTTCGGGATTCCGCTATTCCCATTATTGATGACATATTGGCTCGCAATCGTTTGCCTGTTGTAGTTGGAGGTACAAATTACTATATCCAGGCTCTTGTGAGTCCGTTTCTTCTAGATGATTCTGCAGAAGATATGGAAGAAAGCTGTTTGGGTGACCCACCTGGCATCACGCAGTCTGAGAACAGTTTCCCTGCCGAAAATGATGGTTCAAGCTATGGTTATGATCTGCTCAAGGATATCGATCCAGTTGCTGCTAATAGAATCCATCCAAATAACCATAGAAAGATAAATCAATATATTAGTTTGTACACTCGCACTGGTGTTCCTCCTAGTAAAGTTTTTCAAGGGAAGGCAGCAGAGAATTGGGGTCAAGTTGATAACTTAAGATATGATTGTTGCTTTGTATGTGTGGATGCATCTCTCCCTGTACTGGACAGATATGTAGAGCAGAGGGTAGATTGCATGATGGAAGATGGATTACTCAATGAAGTCTATGACATTTATAATTTGAATGCAGATTATACTAGAGGTTTGCGACAGGCCATTGGTGTCCGTGAATTTGAGCCTCTTCTTAGAACTTGTGTTGTCAAAGACATGTATGAAAGAGAGAGGGAATTGACTGAAGGATCCAGCATAGAAAAGGGCAAGACGTTGTTTAATGGTAATTTGGTGGAGTTGGTGAGATCTTCCTCTGATACTGAATCCACAATTCTTTTGGAAGAAGCAATTGAAAAAGTAAAGGTTAATACCAGGAGACTTGTTCGCCGACAGAAGAGGATGCTCAGTCGACTGCAAACATTGTTTGGTTGGAACATACACTTTGTTGATTCCACAGCACCAATATCAAGCAAATCAGAAGATGTATGGGCACGCCAAGTAGTTGAATCTGCTGTGAAGATAGTTAAATCTTTCTTGAGTGGGAACGGAAGCTTCTCATCCACCTTTGGGACTTCAAATGACACAGGGATGAAAATAATCCAAAGGGACCTCTGGACTCAATACGTGTGCAAGGCGTGCGGAGATCGGGTTCTTAGAGGATTACATGAATGGGAACAACACAGACAAGGTCGTGGGCACCGAAAACGTATTTCAAGTCTTAAGAGCAAGGGTCAATTTCCTGGTTTCGTGGAACAGAAGGTGGAATATTCTCAGTGTGAACAGTGA 1434 0.4393 MASESTVTSNSTDGERPKVVVIMGPTASGKSKLAVDLASHFPVEVINADSMQVYRGLDVLSNKLPLSHQNGVPHHLLGTVSPNVEFTAKAFRDSAIPIIDDILARNRLPVVVGGTNYYIQALVSPFLLDDSAEDMEESCLGDPPGITQSENSFPAENDGSSYGYDLLKDIDPVAANRIHPNNHRKINQYISLYTRTGVPPSKVFQGKAAENWGQVDNLRYDCCFVCVDASLPVLDRYVEQRVDCMMEDGLLNEVYDIYNLNADYTRGLRQAIGVREFEPLLRTCVVKDMYERERELTEGSSIEKGKTLFNGNLVELVRSSSDTESTILLEEAIEKVKVNTRRLVRRQKRMLSRLQTLFGWNIHFVDSTAPISSKSEDVWARQVVESAVKIVKSFLSGNGSFSSTFGTSNDTGMKIIQRDLWTQYVCKACGDRVLRGLHEWEQHRQGRGHRKRISSLKSKGQFPGFVEQKVEYSQCEQ* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01339 477 Hamap tRNA dimethylallyltransferase [miaA]. 19 389 IPR018022 GO:0008033
Phac11g01339 477 Gene3D - 17 418 IPR027417 -
Phac11g01339 477 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 17 395 IPR039657 -
Phac11g01339 477 Gene3D Classic Zinc Finger 419 465 - -
Phac11g01339 477 Gene3D - 145 207 - -
Phac11g01339 477 Pfam IPP transferase 52 349 - -
Phac11g01339 477 FunFam tRNA dimethylallyltransferase 419 462 - -
Phac11g01339 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 261 IPR027417 -
Phac11g01339 477 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 19 292 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01339 Phac-Chr11 10044412 10048201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01339 22 471 C2H2 Transcription Factor Family AT2G27760 56.071 1.32e-175 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01339 K00791 - gmx:100792690 803.897