Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01338 ATGGACATTGAGAACAACGAATCTCCTTGTTCCACTTCACTATCTCCACCAAACCCTAATCCACAACCCAACAATGCTACTCCATCTCACAAGAGGAAAGCAGGTAGAAAGAAGTTTAGGGAGACACGGCACCCTGTGTATAGGGGTGTACGCCAAAGAAACGGCAACAAATGGGTGTGTGAAATTAGGGAACCAATAAAAAAATCAAGGATTTGGGTAGGCACATACCCCACTCCTGAAATGGCTGCTAGGGCACATGACGTGGCTGTCTTAGCCCTTAAGGGCATCTCTGCTAAGTTCAATTTCCCGGATTCCGTTTCCCTTCTCCCCCTTGCAAAGTCTCGTTCTGCTCTAGATATAAGGGAAGCAGCAAAAGCTACTACTCTTGATCAGGCTTTCATGCCAAACACTGCCTTTTCTTCTTCCTCTCATGGCAATTCTAATTCTGAAGAAAGTGTGAATGTTGAAAACAGTTGTTTGAGCATCAGCATGCAGAATGATGAGTCTGAAACAGTGTTCTTTGATGAGGAGGCACTGTATAATATGCCAGGTCTGTTGGATAGTATGGCAGAGGGTTTGCTAATTACCCCGCCCTCTACCAAAACAGCTCTGGACTGGGATCATATAGGTTCTGAAATAGACCTTACTCTCTGGAATAACTAG 663 0.448 MDIENNESPCSTSLSPPNPNPQPNNATPSHKRKAGRKKFRETRHPVYRGVRQRNGNKWVCEIREPIKKSRIWVGTYPTPEMAARAHDVAVLALKGISAKFNFPDSVSLLPLAKSRSALDIREAAKATTLDQAFMPNTAFSSSSHGNSNSEESVNVENSCLSISMQNDESETVFFDEEALYNMPGLLDSMAEGLLITPPSTKTALDWDHIGSEIDLTLWNN* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01338 220 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 24 219 IPR045277 GO:0003700
Phac11g01338 220 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Phac11g01338 220 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Phac11g01338 220 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Phac11g01338 220 Gene3D AP2/ERF domain 46 104 IPR036955 GO:0003700|GO:0006355
Phac11g01338 220 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Phac11g01338 220 Pfam AP2 domain 45 95 IPR001471 GO:0003700|GO:0006355
Phac11g01338 220 MobiDBLite consensus disorder prediction 1 45 - -
Phac11g01338 220 FunFam Ethylene-responsive transcription factor 2 45 104 - -
Phac11g01338 220 CDD AP2 47 105 IPR001471 GO:0003700|GO:0006355
Phac11g01338 220 SUPERFAMILY DNA-binding domain 46 105 IPR016177 GO:0003677
Phac11g01338 220 MobiDBLite consensus disorder prediction 30 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01338 Phac-Chr11 10027661 10028473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01338 11 219 AP2-EREBP Transcription Factor Family AT4G25490 44.762 5.82e-54 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac11g01338 AP2 4.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01338 - - gmx:100793751 322.783