Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01333 ATGGACACAGAGGATCTAGCCGACGACCTTCACAGTCTCAGCTTCGCTTCCACCAATACAACCACCAAACGCAGCACAAGTTTCAGCTCAGAAACCACCACCGTCACGCCCTCCACCTCCTCCCACTTTCTCCACCCGCCACTCCCCAACGCCAAGCCTCACGCGCCCTCCTCCGACCCCTGCGCCTCTTTCATCCACCGTACAAGGCCCCTAGCCTTCTCGCACCTCCGCTTCACGCGCCGCCTCGGCTCCGGCGACATGAGCGCCGTCTATTTGGCGGAGCCCAGGGAAGAAGGTGGCGGCGCGGTGTTCGCAGCGAAGGTGATGGAGAAGGAGGACTTGGCGAGGAGGAACAAGGAAGGGAGAGCGAGGACAGAAAGGGAAATTCTGGAAATGTTGGATCACCCGTTCTTGCCCACGCTCTACGCGTCCATCCACGCGCCCAAATGGCTCTGCTTCCTAACGCCGTTCTGCCCGGGCGGTGACTTGCACGTCCTCCGCCAGCGCTTCCCCAACAAACGCTTCCTCGAATCCGCCGTCAGGTTCTACGCATCCGAAGTTTTGTTGGCACTTGAATATCTCCATATGCTGGGGATTATCTACCGCGACCTCAAGCCCGAAAACGTGTTGATAAGATCTGACGGCCACATCATGCTCACCGACTTCGACCTGTCACTAAAATGCGACGATTCCACATCAACGGCACAGATAATCTCCGACCAAAACCCCCTTCCCACGCGCAACAACTGCCACGTGGAGGGCGCACGGGTGGCGTCGTCGTCGTGCATAATCCCGAGCTGCATAGTCCCGACGGCGTCGTGTTTCCAGCCGAGACGCAAGCGGAAGAAGAAGCAGAAGCTGCGTAGCGGGCCCGCGTTCGTGGCGGAGCCCATGAACGTTCGGTCGATGTCATTCGTGGGGACCCACGAGTACTTGGCGCCGGAGATCGTGTCCGGGGAGGGCCACGGTAGTGCCGTGGACTGGTGGACTTTGGGGATATTTATGTTCGAACTGTTTTACGGCGTGACACCCTTCAAGGGCATGGACCACGAGCTAACCCTGGCGAACATTGTGGCTCGAGCCCTTGAGTTCCCGAAGGAACCGGCTTGTTCAGGGGCCATGAAGGAGCTTATATCGCAGTTGCTGGTTAAGGACCCCGCAAAGAGGCTAGGGTCGCTCATGGGGGCTTCTGCGATCAAGCAACACTCTTTTTTTGACGGCGTTAATTGGGCGTTGCTTAGGTGTACAACTCCACCCTTTCTTCCCCCACCTAACGCCAAAGCTGTATATGATGATGATCATCACACTTCCCCTGATATTTTCGTTGATTCTTATTAA 1338 0.5725 MDTEDLADDLHSLSFASTNTTTKRSTSFSSETTTVTPSTSSHFLHPPLPNAKPHAPSSDPCASFIHRTRPLAFSHLRFTRRLGSGDMSAVYLAEPREEGGGAVFAAKVMEKEDLARRNKEGRARTEREILEMLDHPFLPTLYASIHAPKWLCFLTPFCPGGDLHVLRQRFPNKRFLESAVRFYASEVLLALEYLHMLGIIYRDLKPENVLIRSDGHIMLTDFDLSLKCDDSTSTAQIISDQNPLPTRNNCHVEGARVASSSCIIPSCIVPTASCFQPRRKRKKKQKLRSGPAFVAEPMNVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGMDHELTLANIVARALEFPKEPACSGAMKELISQLLVKDPAKRLGSLMGASAIKQHSFFDGVNWALLRCTTPPFLPPPNAKAVYDDDHHTSPDIFVDSY* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01333 445 Gene3D Phosphorylase Kinase; domain 1 76 161 - -
Phac11g01333 445 FunFam serine/threonine-protein kinase D6PK-like 300 423 - -
Phac11g01333 445 FunFam serine/threonine-protein kinase D6PK-like 162 229 - -
Phac11g01333 445 SUPERFAMILY Protein kinase-like (PK-like) 55 435 IPR011009 -
Phac11g01333 445 Pfam Protein kinase domain 302 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01333 445 Pfam Protein kinase domain 79 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01333 445 ProSitePatterns Protein kinases ATP-binding region signature. 82 107 IPR017441 GO:0005524
Phac11g01333 445 PANTHER FLIPPASE KINASE 1-RELATED 22 427 - -
Phac11g01333 445 MobiDBLite consensus disorder prediction 18 45 - -
Phac11g01333 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Phac11g01333 445 ProSiteProfiles Protein kinase domain profile. 76 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01333 445 Gene3D Transferase(Phosphotransferase) domain 1 301 423 - -
Phac11g01333 445 Gene3D Transferase(Phosphotransferase) domain 1 162 237 - -
Phac11g01333 445 SMART serkin_6 76 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01333 445 MobiDBLite consensus disorder prediction 18 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01333 Phac-Chr11 9952333 9955679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01333 4 445 AGC Kinase Gene Family AT3G44610 63.020 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phac11g01333 Pkinase 6.7e-33 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02105 5 40643069 40654867 Phac11g01333 11 9952333 9955679 PCT