Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01323 ATGGACTCACCAATGGAGTTTTGGGGTGTTGAGGTTAAGGTTGGGCAAACTGTGAAGGTTGATCCCATGGATCCAGTGAGTGCATACATACACATTTCTCAGGTTGCCCTTGGAGAGGCGAAAAAGGAAAAGACAAATGAAGCTGTGGTTCTGTACTTGAAAGTTGATGGCAAGAAGATTGTTTTGGGAACCCTTAAAAGGGATGACATCCCCCACCTTTCGTTGGATTTGGTTCTCGATTCTGAGTCGGAGCTTTCGCACTCTTCCAAAAGTGCTAGTGTCTTTGTTTGTGGATACAAAGTTCTAACTGACGAGGGTAATGTTGCTGACTTTTCTGATAGTGAAGAAGACGAGGAAGATCTTGTCTTAAATGGTCAAGAAAATGGGAAACCTGTGATAAAAGCTGAAGGTGCAAAGGTTACCAAGCCCACTAAATCTGCTCCTGCGGCAGTTGCATCAGTAAAACAAGTTAAGACTGTTGATCCAAAGAAAGATGAGGAGGATGATTCTGATTCTGACGAATCTGATGATGACCTTGATAGTGATGATGAATCTGGAACTTCTGACGAGATGGATGCTGATAGCGACAGCGACGAGGCTAGTGAGAGTGATGAAGAGACCCCTGTGAAGAAGGTGGATCAGAGCAAGAAGAGACCAAATGTGTCTGCATCAAAAACTCCACCTTCTTCCAAGAAAGCTAAAACTGCTACTCCTGAAAAAACTGATGGTAAGAAAAATGTACATGTAGCAACTCCCTATCCTACGAAGAAAGGTGCAAAGACTCCCAAAAGTGCTACAAAAGGCCAGTCTCCCAATTCTGCTGGACAACTATCTTGCGGACCTTGTAAAAAGTCTTTCACCAACGAAGCTGGTTTCCAACAACATAAGAAGGCTAAGCATGGTGGTCAGTGA 912 0.4375 MDSPMEFWGVEVKVGQTVKVDPMDPVSAYIHISQVALGEAKKEKTNEAVVLYLKVDGKKIVLGTLKRDDIPHLSLDLVLDSESELSHSSKSASVFVCGYKVLTDEGNVADFSDSEEDEEDLVLNGQENGKPVIKAEGAKVTKPTKSAPAAVASVKQVKTVDPKKDEEDDSDSDESDDDLDSDDESGTSDEMDADSDSDEASESDEETPVKKVDQSKKRPNVSASKTPPSSKKAKTATPEKTDGKKNVHVATPYPTKKGAKTPKSATKGQSPNSAGQLSCGPCKKSFTNEAGFQQHKKAKHGGQ* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01323 303 MobiDBLite consensus disorder prediction 204 218 - -
Phac11g01323 303 Gene3D Nucleoplasmin core domain 2 107 - -
Phac11g01323 303 ProSitePatterns Zinc finger C2H2 type domain signature. 279 300 IPR013087 -
Phac11g01323 303 MobiDBLite consensus disorder prediction 166 203 - -
Phac11g01323 303 MobiDBLite consensus disorder prediction 262 292 - -
Phac11g01323 303 MobiDBLite consensus disorder prediction 219 234 - -
Phac11g01323 303 MobiDBLite consensus disorder prediction 110 303 - -
Phac11g01323 303 Pfam Nucleoplasmin-like domain 7 100 IPR041232 -
Phac11g01323 303 SUPERFAMILY Nucleoplasmin-like core domain 5 79 IPR036824 -
Phac11g01323 303 ProSiteProfiles Zinc finger C2H2 type domain profile. 277 303 IPR013087 -
Phac11g01323 303 FunFam Histone deacetylase HDT1 5 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01323 Phac-Chr11 9749763 9752667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01323 5 300 C2H2 Transcription Factor Family AT5G03740 39.623 2.07e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01323 - - gmx:547649 367.466