Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01318 ATGGAGCAACAGAATCTTTCAGACACCGATCAGTTTTTGGCTCTGGGCGCCACATCGGACGAGTCACAGAGTCCTAAGGAACCAGTGACGCATGTCCACGCCGCCGCAGACAATAACAACAATGTTGTAAACGCAGTCAATGTTGCAACTGGTCCTGCTTCTGGTTCTGAGCTTGTTGTGGCCGTACCAAACTCCGAGGCTGTAGGTTCGGGATTGGTGGTGAAGCGAGGAAGGGGGAGGCCGAGGAAGCATGAGGCTGTCGGGAACACGGCGTCTCCGTTGTCGGCGATGACGCCGGCGCCACCAGGATTTTCCAATCAGACCAAGAGAGGCAGGGGACGCCCTCGTGGTTCTGGGAAACTGCAGGCTATAGCTTCCATTGGTGGGTTTATGCAAGAAACAGCAGGGGGAAACTTCATACCTCACGCACTGAGTGTGCAAATTGGAGAGAATTTGGTAGGATTGATAATGTCCTTTTTTGAGAAATGCCCGCTTTCAGTTTGCATACTTTCTGCTACTGGTGCTATTTCAAATGTGACCATTCGTGAACATCCTCCCTCTAATCATGTTACGAGACTTGAGGGTACCTATGAGATATTGTCTTTATCAGGAACTTCTACCTTCGCTTGTGGCATTAATGGTCCAGTTCGTACAATTGGATTGTTGAGAATTTCAATTGCTAAATCTGATGGAAATGTTTTTGGGGGAATCCTTGAGAGTGCATTGGTAGCAGGTTGCCCTATTCAGGTAAGAATTTTACAAGATGTGGTGGAGATTTATCCTTTGATTTCACATAAACTGTGCTATTAA 810 0.4753 MEQQNLSDTDQFLALGATSDESQSPKEPVTHVHAAADNNNNVVNAVNVATGPASGSELVVAVPNSEAVGSGLVVKRGRGRPRKHEAVGNTASPLSAMTPAPPGFSNQTKRGRGRPRGSGKLQAIASIGGFMQETAGGNFIPHALSVQIGENLVGLIMSFFEKCPLSVCILSATGAISNVTIREHPPSNHVTRLEGTYEILSLSGTSTFACGINGPVRTIGLLRISIAKSDGNVFGGILESALVAGCPIQVRILQDVVEIYPLISHKLCY* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01318 269 ProSiteProfiles PPC domain profile profile. 136 269 IPR005175 -
Phac11g01318 269 PRINTS AT-hook-like domain signature 75 85 IPR017956 GO:0003677
Phac11g01318 269 PRINTS AT-hook-like domain signature 107 118 IPR017956 GO:0003677
Phac11g01318 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 41 251 IPR039605 GO:0003680
Phac11g01318 269 Gene3D - 141 259 - -
Phac11g01318 269 MobiDBLite consensus disorder prediction 91 105 - -
Phac11g01318 269 SMART AT_hook_2 109 121 IPR017956 GO:0003677
Phac11g01318 269 SMART AT_hook_2 75 87 IPR017956 GO:0003677
Phac11g01318 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 139 253 - -
Phac11g01318 269 MobiDBLite consensus disorder prediction 1 28 - -
Phac11g01318 269 MobiDBLite consensus disorder prediction 76 118 - -
Phac11g01318 269 CDD DUF296 141 252 IPR005175 -
Phac11g01318 269 MobiDBLite consensus disorder prediction 1 25 - -
Phac11g01318 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 252 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01318 Phac-Chr11 9596334 9598873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01318 74 250 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 39.326 7.56e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01318 - - gsj:114378162 269.626