Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01306 ATGGAGAGGAACGAAAATTACAGTTCAGAGGAGGAATGCATGGAGGATTATCGGCGTGGAGGGTACCATGCCGTTCGAATCGGCGATGCTTTCAACAATGGCCGCTACGTCGTGCAGTCCAAGCTCGGTTGGGGCCATTTTTCCACCGTCTGGCTCGCCTGGGACACTCTCAATTCGCGTTTTGTAGCCCTTAAAATTCAGAAGAGTGCGCAACATTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATAGCTGAGGGAGACCTGGATGATAAGAAATGTGTTGTGAAGCTTTTGGATCATTTTAAGCATTCGGGGCCTAATGGACAGCATGTCTGTATGGTTTTCGAATTCCTGGGTGACAATCTTCTCACCCTTATTAAATATACTGACTATCGTGGGGTTCCTCTCCACATGGTTAAAGAAATCTGTTTTCATATTTTGGTGGGCTTAGATTACTTGCATCGTGAGCTTTCTGTTATACACACTGATTTGAAGCCAGAAAATGTGTTGCTTCTGTCACTGATAAATGCATCCAAAGATCCTAGGAAATCGGGTGCTTCGCTCATCCTTCCTAATACGAAGGATAAGGCTGCGTCTAATAATGCGTCTAATAATGGGACTCACCAAGACAATAAAATTTTGAATGGAGATCCACTGAAGAACCAGAAAAGGAAAATAAAGAGGAAGGCTAAGGTAGCTCAAGGCTTTGTTGGGAAGGAAACTTCAGAGGAAGCTGAGGATTATAAAGGACCCGAGCAAGAAGATTGTGGGAATGATGTAAAATCAAGTGTAGAATCTGTTGAAGATAAACCTGATAGTTCTTTGAGTAAAGATGAATCAACAAAGACTTTTGAAAAGGATGTTTCACAAGGAAGTCATAGTCATATGAGTAGCAGCCGTTCCATGAAAAAGAAGTTGCTGGCAGCTGTTGATCTTAGGTGCAAGCTGGTTGATTTTGGTAGTGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAAACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGATCCAAATACTCAACCCCAGCAGATTTGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGAGATGAGGACCATCTGGCATTGATGATGGAGCTTGTCGGGAAGATGCCTCCGAAGATTGCACTAGGTGGCCGCTATTCTCGAGAATTTTTCAATAGACATGGTGACTTGAGGCACATCAACAATTTGAGATTCTGGCCAATGAATAAGGTGCTGATGGACAAGTATAATTTCAGTGAGCAAGACACAAAGGATATGGTTGATTTCCTTGTTCCAATGCTTGATTTCGTCCCAGAAATGAGACCAACTGCTGCTCAGTGCCTTAGTCATCCATGGATGAATGCAGGTCCTCGTACTCTTCAGCCCTCAATACCTACCGCTCAACCTGATGCCATAAATGAGGAATTGTCTGAAAGAAGGAAGAGGGAAGCTGCTGAAAAGGAGTCAGTGGAAATTGGTTTGAAGAACATAGCCATTAAAGGAACTTCTGAGCCTCTCAAAGACTCCCAACCTCTAAAATCATCCAAATAG 1626 0.4268 MERNENYSSEEECMEDYRRGGYHAVRIGDAFNNGRYVVQSKLGWGHFSTVWLAWDTLNSRFVALKIQKSAQHYTEAAMDEIKILKQIAEGDLDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYTDYRGVPLHMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSLINASKDPRKSGASLILPNTKDKAASNNASNNGTHQDNKILNGDPLKNQKRKIKRKAKVAQGFVGKETSEEAEDYKGPEQEDCGNDVKSSVESVEDKPDSSLSKDESTKTFEKDVSQGSHSHMSSSRSMKKKLLAAVDLRCKLVDFGSACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELVGKMPPKIALGGRYSREFFNRHGDLRHINNLRFWPMNKVLMDKYNFSEQDTKDMVDFLVPMLDFVPEMRPTAAQCLSHPWMNAGPRTLQPSIPTAQPDAINEELSERRKREAAEKESVEIGLKNIAIKGTSEPLKDSQPLKSSK* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01306 541 Gene3D Transferase(Phosphotransferase) domain 1 119 479 - -
Phac11g01306 541 SMART serkin_6 36 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01306 541 FunFam Serine/threonine-protein kinase SRPK-like protein 308 478 - -
Phac11g01306 541 CDD STKc_SRPK 25 478 - -
Phac11g01306 541 MobiDBLite consensus disorder prediction 185 304 - -
Phac11g01306 541 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Phac11g01306 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Phac11g01306 541 ProSiteProfiles Protein kinase domain profile. 36 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01306 541 Pfam Protein kinase domain 36 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01306 541 Pfam Protein kinase domain 315 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01306 541 FunFam CMGC/SRPK protein kinase 22 121 - -
Phac11g01306 541 MobiDBLite consensus disorder prediction 498 515 - -
Phac11g01306 541 SUPERFAMILY Protein kinase-like (PK-like) 31 491 IPR011009 -
Phac11g01306 541 Gene3D Phosphorylase Kinase; domain 1 12 118 - -
Phac11g01306 541 MobiDBLite consensus disorder prediction 197 220 - -
Phac11g01306 541 MobiDBLite consensus disorder prediction 498 541 - -
Phac11g01306 541 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 7 501 - -
Phac11g01306 541 MobiDBLite consensus disorder prediction 244 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01306 Phac-Chr11 9425681 9430058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01306 6 527 EF-hand Containing Proteins AT5G22840 65.966 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Phac11g01306 Pkinase 2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01306 K08832 - gmx:100790060 930.628