Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01305 ATGGAGAGGAACGAAAATTACAGTTCAGAGGAGGAATGCATGGAGGATTATCGGCGTGGAGGGTACCATGCCGTTCGAATCGGCGATGCTTTCAACAATGGCCGCTACGTCGTGCAGTCCAAGCTCGGTTGGGGCCATTTTTCCACCGTCTGGCTCGCCTGGGACACTCTCAATTCGCGTTTTGTAGCCCTTAAAATTCAGAAGAGTGCGCAACATTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATAGCTGAGGGAGACCTGGATGATAAGAAATGTGTTGTGAAGCTTTTGGATCATTTTAAGCATTCGGGGCCTAATGGACAGCATGTCTGTATGGTTTTCGAATTCCTGGGTGACAATCTTCTCACCCTTATTAAATATACTGACTATCGTGGGGTTCCTCTCCACATGGTTAAAGAAATCTGTTTTCATATTTTGGTGGGCTTAGATTACTTGCATCGTGAGCTTTCTGTTATACACACTGATTTGAAGCCAGAAAATGTGTTGCTTCTGTCACTGATAAATGCATCCAAAGATCCTAGGAAATCGGGTGCTTCGCTCATCCTTCCTAATACGAAGGATAAGGCTGCGTCTAATAATGCGTCTAATAATGGGACTCACCAAGACAATAAAATTTTGAATGGAGATCCACTGAAGAACCAGAAAAGGAAAATAAAGAGGAAGGCTAAGGTAGCTCAAGGCTTTGTTGGGAAGGAAACTTCAGAGGAAGCTGAGGATTATAAAGGACCCGAGCAAGAAGATTGTGGGAATGATGTAAAATCAAGTGTAGAATCTGTTGAAGATAAACCTGATAGTTCTTTGAGTAAAGATGAATCAACAAAGACTTTTGAAAAGGATGTTTCACAAGGAAGTCATAGTCATATGAGTAGCAGCCGTTCCATGAAAAAGAAGTTGCTGGCAGCTGTTGATCTTAGGTGCAAGCTGGTTGATTTTGGTAGTGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAAACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGATCCAAATACTCAACCCCAGCAGATTTGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGAGATGAGGACCATCTGGCATTGATGATGGAGCTTGTCGGGAAGATGCCTCCGAAGACTATTTTCCAGATCGTCATGCTGTGA 1239 0.4253 MERNENYSSEEECMEDYRRGGYHAVRIGDAFNNGRYVVQSKLGWGHFSTVWLAWDTLNSRFVALKIQKSAQHYTEAAMDEIKILKQIAEGDLDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYTDYRGVPLHMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSLINASKDPRKSGASLILPNTKDKAASNNASNNGTHQDNKILNGDPLKNQKRKIKRKAKVAQGFVGKETSEEAEDYKGPEQEDCGNDVKSSVESVEDKPDSSLSKDESTKTFEKDVSQGSHSHMSSSRSMKKKLLAAVDLRCKLVDFGSACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELVGKMPPKTIFQIVML* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01305 412 ProSiteProfiles Protein kinase domain profile. 36 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01305 412 SMART serkin_6 36 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01305 412 MobiDBLite consensus disorder prediction 185 304 - -
Phac11g01305 412 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Phac11g01305 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Phac11g01305 412 Pfam Protein kinase domain 36 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01305 412 Pfam Protein kinase domain 315 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01305 412 SUPERFAMILY Protein kinase-like (PK-like) 31 409 IPR011009 -
Phac11g01305 412 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 7 406 - -
Phac11g01305 412 FunFam CMGC/SRPK protein kinase 22 121 - -
Phac11g01305 412 Gene3D Phosphorylase Kinase; domain 1 22 121 - -
Phac11g01305 412 Gene3D Transferase(Phosphotransferase) domain 1 90 177 - -
Phac11g01305 412 MobiDBLite consensus disorder prediction 197 220 - -
Phac11g01305 412 Gene3D Transferase(Phosphotransferase) domain 1 279 406 - -
Phac11g01305 412 MobiDBLite consensus disorder prediction 244 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01305 Phac-Chr11 9425681 9430058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01305 6 404 EF-hand Containing Proteins AT5G22840 68.421 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Phac11g01305 Pkinase 1.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01305 K08832 - gmx:100790060 703.36