Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01302 ATGTCTCGTCGAGGAAACCAGTCCGATTCTAACCGTCCGCCGCACTCCACGGCTCCTTCTCCCGCTGCCGGAGGCCGGGGCCGGGGTCGTGGTCGCAGTCGCGGCCGCGGTGAACATTCCGCTCAAACAGCATACTCGGCTTCCCCTGCGCACACTTCATCTGCTGTTACTCCGGCTCCTTCCACTGCCGCTCCTCCCCGTGCTGTGGCAGCCGTCCCTGCATCGGCGGCTCCTGGTCCATCCCTCCCTCCGCCGGTTCAAGTCTCGCCGGCGCCAGTTTCTGGATCAGTGGCAGCGGTTGCTACATCGGCGCAGTCTCTGGCAGTAGAACCTCTTAGTTCGACGCTCGAGAAGCAACTGACATTGTCTTCGTCGGCACCGTCGTCGTCAAAGGCTGTCAGATTCCCGGACCGGCCAGGAATAGGAAGGGCGGGAAAGAAGATCCAAGTGCGCGCAAATCATTTTCCTGTGCAAGTTGCGCAGATTGATATTTATCACTACGATGTCACGATCACCCCGGAGATCACTTCAAAGAAGATTTCCAGAGATGTTATCGGCTTGTTGGTCCAAGCCCACCGCGAATCTATCTTAGCAAATCGCGTGCCGGCGTATGATGGACGAAAAAGTCTTTTTACATCTGGACCTTTGCCATTCGAATCTAAGGATTTTAAGGTCAAGTTGGGGGATGAGGATGAACCAGGGTCTTCTGCCACTCCTACATCTGCCAGAAAAAAGCGTGATCGGGAGTTTAGGGTGTCTATACGATTTGCTTCGAAGACTGACCTTCATCACCTTATTCAGTTTCTTAGTCGCAGTCAGTTGGACTGTCCACAGGAAACTATTCAGGCCCTTGATGTTGTTCTGCGGGCTACACCTTCTGAAAAGTTTGATGTGGTTGGGAGATCCTTTTTTTCTCCTGCATTGGGACCGAAAGGACCTTTGGGTAGTGGGACTGAATTTTGGCGAGGTTATTACCAGAGTCTTCGTCCAACTCAGATGGGCCTGTCTCTTAATATTGATGTGTCGGCGAGAGCATTTTATGAGGCCATTCCTGTCCTTGATTTCATTTCGAAGAATTATAGACTCGATCTTCGTAGGCCTTTGCATGATCAGGATCGAGTTAAGATTAAGAGAGCTTTGAGAGGAGTCAAGGTACAAGTTAATCATGGACAGAATATCAGACGTTACAAAGTCACTGCTGTCACAAAAGAACCCCTCAGAGGCTTAATGTTTACTCTTGATGACAATGGAACAAAAAACTCAGTTGTTCAGTATTTCCAAGAGAAATATAATATTTCTTTGCAGTTTACACAGCTTCCTGCTCTTCAAGCTGGTTCCGACACCAAGCCAATTTTTTTGCCTATAGAGCTTTGTACAATCGTGGCTGGACAGAGATATACCAAGAAACTGAATGAGAGTCAAGTAACTGCTCTTTTAAAGGCAACTTGTCAGCGTCCTCATGATAGGGAAAACTCTATCAGACAGGTTGTCAAGCAGAGCAATTTCAGTACTGACCAATTTGCTCGGGACTTTCAAATTCGAGTCAGGGAGGATCCAATATTGCTTGATGCTCGTGTCTTACCTCCCCCTATGCTTAAATACCATGGATCAGGTGGCGAGTCACAGGTTCAACCAAGGATGGGTCAGTGGAATATGATTAATAAGAAAGTGATTATTGGCGGTACTGTTGAACACTGGACATGCCTCAACTTATCTGGAAGAATATACAGAGATCTTCCATTTCAACTTTGTCAGAATTTGGTTGAAATGTGTAACAGCAAGGGAATGCGTTTTAAAGGAACTCCAATAGTGCCTATAACAACAGCTCCAAGTGGTCAAATAGAGAATGCTCTGAAGAACCTGCATAAGCACTGTATGGAGGCCGGAGGACTTCAATTGTTGATCATTATTTTACCTGATGTCAAGGGGTCTTATGGGAAAATTAAGCGCATATGTGAAACTGAGTTAGGAATAGTATCTCAGTGTTGTCAGCCTAATCAAGTGACGAAAATGAACAAGCAATATCTTGAAAATCTATCCCTCAAGATAAATGTGAAGGTTGGTGGTACGAACACGATATTGAATGATGCATTCACGAATAGAATACCTCATGTCTCCGATACACCGACAATCATCTTTGGTGCAGATGTAACACATCCTCAACCAGGGGAGGACACTAGTCCTTCTATTGCTGCAGTAGTGGCATCAATGGATTGGCCTTATGTAACAAGGTATAAAGGAGTTGTTTCTGCTCAAAAACATCGGGAAGAAATTATTCAAGATCTTTTCATTGAACGTGAAGATCCGGTGAAGGGAATTGTACATTCAGGAATTATCAGGGATTTGTTTCGTGCTTTCCGGAATTCAACTAATCGAAAGCCAGAAAGGATTATATTCTACAGAGATGGTGTGAGCGAGGGCCAATTTAATCAAGTGCTACTTTATGAGATGGATGCCATAAGACGGGCCTGTAGCTCGTTACAAGCTGACTATTTACCACCTGTTACTTTTGTGGTGGTTCAGAAGAGGCACCATACTCGGTTGTTCCCTGCGGATCACAGAGCTCGTGATAGTACAGATAGAAGTGGAAATATAATGCCAGGGACTGTAGTTGACACAACCATATGTCATCCCCGGGAGTTTGATTTTTACCTGAATAGTCATGCTGGAATTCAGGGAACAAGCCGACCAACTCATTATCATGTATTGTTCGATGAAAATAAATTTACTGCTGATGAGTTGCAGATTTTAACCAATAATTTGTGCTATACGTATGCAAGATGTACTCGATCAGTTTCTATAGTTCCTCCCGCGTATTATGCTCATTTGGCCGCATTCCGGGCACGCTATTACATAGAAGGCGATGCATCAGAATCTGGTTCTGCAACTGGAGGCAGGGGTGGTTTCGCCAACTTTGAGGTTAAATTGCCCTCGGTGAAAAGTAATGTCTCGGACGTGATGTTTTTCTGTTGA 2973 0.4561 MSRRGNQSDSNRPPHSTAPSPAAGGRGRGRGRSRGRGEHSAQTAYSASPAHTSSAVTPAPSTAAPPRAVAAVPASAAPGPSLPPPVQVSPAPVSGSVAAVATSAQSLAVEPLSSTLEKQLTLSSSAPSSSKAVRFPDRPGIGRAGKKIQVRANHFPVQVAQIDIYHYDVTITPEITSKKISRDVIGLLVQAHRESILANRVPAYDGRKSLFTSGPLPFESKDFKVKLGDEDEPGSSATPTSARKKRDREFRVSIRFASKTDLHHLIQFLSRSQLDCPQETIQALDVVLRATPSEKFDVVGRSFFSPALGPKGPLGSGTEFWRGYYQSLRPTQMGLSLNIDVSARAFYEAIPVLDFISKNYRLDLRRPLHDQDRVKIKRALRGVKVQVNHGQNIRRYKVTAVTKEPLRGLMFTLDDNGTKNSVVQYFQEKYNISLQFTQLPALQAGSDTKPIFLPIELCTIVAGQRYTKKLNESQVTALLKATCQRPHDRENSIRQVVKQSNFSTDQFARDFQIRVREDPILLDARVLPPPMLKYHGSGGESQVQPRMGQWNMINKKVIIGGTVEHWTCLNLSGRIYRDLPFQLCQNLVEMCNSKGMRFKGTPIVPITTAPSGQIENALKNLHKHCMEAGGLQLLIIILPDVKGSYGKIKRICETELGIVSQCCQPNQVTKMNKQYLENLSLKINVKVGGTNTILNDAFTNRIPHVSDTPTIIFGADVTHPQPGEDTSPSIAAVVASMDWPYVTRYKGVVSAQKHREEIIQDLFIEREDPVKGIVHSGIIRDLFRAFRNSTNRKPERIIFYRDGVSEGQFNQVLLYEMDAIRRACSSLQADYLPPVTFVVVQKRHHTRLFPADHRARDSTDRSGNIMPGTVVDTTICHPREFDFYLNSHAGIQGTSRPTHYHVLFDENKFTADELQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGDASESGSATGGRGGFANFEVKLPSVKSNVSDVMFFC* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01302 990 MobiDBLite consensus disorder prediction 120 140 - -
Phac11g01302 990 FunFam protein argonaute 10-like 701 990 - -
Phac11g01302 990 SMART PAZ_2_a_3 350 482 IPR003100 GO:0005515
Phac11g01302 990 Pfam PAZ domain 354 478 IPR003100 GO:0005515
Phac11g01302 990 SUPERFAMILY PAZ domain 345 502 IPR036085 GO:0005515
Phac11g01302 990 ProSiteProfiles PAZ domain profile. 350 462 IPR003100 GO:0005515
Phac11g01302 990 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 128 954 - -
Phac11g01302 990 MobiDBLite consensus disorder prediction 39 60 - -
Phac11g01302 990 Gene3D - 526 696 - -
Phac11g01302 990 CDD PAZ_argonaute_like 349 461 - -
Phac11g01302 990 ProSiteProfiles Piwi domain profile. 633 953 IPR003165 GO:0003676
Phac11g01302 990 MobiDBLite consensus disorder prediction 1 92 - -
Phac11g01302 990 Pfam Argonaute linker 2 domain 488 534 IPR032472 -
Phac11g01302 990 Gene3D - 702 990 IPR036397 GO:0003676
Phac11g01302 990 MobiDBLite consensus disorder prediction 1 17 - -
Phac11g01302 990 SUPERFAMILY Ribonuclease H-like 618 953 IPR012337 -
Phac11g01302 990 Pfam Piwi domain 634 952 IPR003165 GO:0003676
Phac11g01302 990 Pfam Argonaute linker 1 domain 299 348 IPR014811 -
Phac11g01302 990 Pfam N-terminal domain of argonaute 146 288 IPR032474 -
Phac11g01302 990 MobiDBLite consensus disorder prediction 225 246 - -
Phac11g01302 990 CDD Piwi_ago-like 506 952 IPR045246 -
Phac11g01302 990 FunFam Argonaute 10 526 695 - -
Phac11g01302 990 SMART DUF1785_2 297 349 IPR014811 -
Phac11g01302 990 Gene3D paz domain 344 466 - -
Phac11g01302 990 SMART Piwi_a_2 633 953 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01302 Phac-Chr11 9398862 9405116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01302 127 990 Eukaryotic Initiation Factors Gene Family AT1G48410 58.174 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01302 K11593 - gmx:100799033 1392.48