Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01292 ATGGATTTCTCTTACCGTAGATTGCTGCTACAGAACGAGGACGTTCCAATCTCCACGTCCATGCCTCCTTTCCCTAACGCCAAACACGCCACAAACGCTTCCTCGCCGCAAGTGTCTCTAGGAAATTCTCTTCAAGTGTCCATTCGTCCGGTTTTCACTTCGAGTGTTGCCTACGTCTTCCTCATCCTCTTCACCACCTTCTTCTTCATCGGATTCGTGTTTCTCTACTTCCAACAGCACTCCTCCACGTCGGACTCTGATTCCGGCGCCATCCGCAGACGAGCGTCGTCGGATTCCGTGGCATCGAAGTCTCTGGCGGTGGTGGCGGAGACGGCAAGGCAAGGAGAGTGCGCTATATGTCTGGAAGAGGTGGGAGAGGGAGAGGCGGTGAAGATGATTGCGTATTGCAAGCACGTGTTCCACGCGGATTGTATTGACAGGTGGCTGGAGAAGCAGGTGACGTGCCCCGTGTGCCGGTGCTGCTGCGAGAGGTGTGGAGAGGTTGAGTCGGTGACAGTGAGAGGAGGAGAAGGAGAAGATGCAGAAGTGGTTTCCGTAACAAACTTCGATTAG 573 0.5428 MDFSYRRLLLQNEDVPISTSMPPFPNAKHATNASSPQVSLGNSLQVSIRPVFTSSVAYVFLILFTTFFFIGFVFLYFQQHSSTSDSDSGAIRRRASSDSVASKSLAVVAETARQGECAICLEEVGEGEAVKMIAYCKHVFHADCIDRWLEKQVTCPVCRCCCERCGEVESVTVRGGEGEDAEVVSVTNFD* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01292 190 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Phac11g01292 190 SMART ring_2 117 158 IPR001841 -
Phac11g01292 190 Pfam Ring finger domain 116 159 IPR001841 -
Phac11g01292 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 159 IPR013083 -
Phac11g01292 190 SUPERFAMILY RING/U-box 116 163 - -
Phac11g01292 190 PANTHER RING FINGER DOMAIN-CONTAINING 25 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01292 Phac-Chr11 9232245 9233729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01292 52 186 Rapid Response to Elicitors AT3G05200 36.364 1.86e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01292 - - pvu:PHAVU_011G087200g 312.768