Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01290 ATGGCTATTGCTGGTCTACACAGTGTGTCTGTGCTCGACTCTCCTTTCCTCAGGGACTCCCATTCCCAGTCGTCTAGGAGAGGGGGAGAGGGAAGACGGGGAAGCACCCGGTCATCTTCACTCTTGCAAATGTGGCGAGAGATTGAAGATGAACATGTGGTGAATCAAGTTCAAGGAAGACCTGGTGAAGTACCTCTTGAGCAAAGGAGGGGGGATGGGTTGATTGCTGAGCTCTCACAGGAAGATAGATTGGATATCCAAGAGAGAGGGCAGGGACATGTTTTAGAAGATGCAGTTTTGGGTGAGAATGAATCTGAAACGTGGTCACAGTCACAAAGTCAGAATGAGTTCCATGAAGATCACGAGGATTTAAATAATTCTAGCTGTGAAAACTCTTCTGATTTAGGAGAAGTTGAAAGGGAAAGAGTGAGGCAAATTTTCAGGGAATGGATGAATAGTGGTGCCAGGGATCATGTATCAAACGTATCCAGAAGAAATAGTGGTTCAAGGAGAGAATGGCTTGGGGAAACTGAGCAGGAAAGGGTGAGAATTATTCGGGAGTGGGTACAAATGAGTAGCCAGCAGAGAAGTGTTTCCTCTGGGGAAAACAGGGAAGAATCATCTGCTGAAATTGGTACACAAATTGAACGTGTTCGTGATGGACTCATCGTCAACCAGAATGGGGGCCAAAATGAGCTTTCACGGAGGGGCATACGTAAATTATGTGGCCGACAGGCTATGCTTGATATGCTTAAAAAGGCTGAAAGAGAGAGGCAGAGAGAAATTGAGGACTTGTCCGTACATCGGGCTGTATCTCAATTCCCCTATCGCAATCGCATTCAGGCATTTCTTAGAGGCAGATTCTTGAGAAATGATAGACCTGTTGATAATAACAGGCCCCTTTCTGTGGCAGAAAGTGAACTGGGCTTCTTGAGGCGTAAACAAACTGTATCAGGTCTAAGGGAGGGATTTATCGCTAGAAAGGAGAATAGTGGTTGCAGTCAAGCAACCAGCAATGTATCTGATACCTCGTCAAATGTTGATATTGATCTTAATACTAATGAACAAATGGGATCAAGCAGTTCACATTTGGTCCCAATTGTACATTCTGAACTGTCTGACCCTAATGACAGAGGAAGCGATGGTCTCGGGGTATCGGACAGCCAGAGATGTGTACAAGGTGCCACATCTGAGAATCTAAATTGGCAAGAATCTATTGGTCAAGTAGGAGATGGAATGAAGCATTTGCCTATTGAATCACTAGATTGTCAATCATCATTCAGTGCCAGTGTTGAAAGAGTGAACAACACCGAGCAAAATGTTGATGTGATGCCAACTGAATATAGTGCTAATGAAATTACCCAACAAAGCTTGCGAATTGAAGAATCACATCATAGTAATAACCAGGAATTCAATGAGATGCATATTGAGCATTCTCAGCTGGGTGATATAAATAGTATTGAAAACAATTCTTCAAATCATGATATTCATATGGATGGTAATGTTGTTGATGATGTAAATTGGAATGGATCTGGTGCTCTAGAAGTAGAACAGCCAGAAGAAGCTTTTGAAAATGAAGGAAGTGAGTGGTATCAGAATAATACCGAATGGAGAAATATCACTGAGGAAAATGCGGATGGTAATCAGCTCAGTAATTCGGCAAATGAGTGGCCTGAAAACACTTCGGGAAACGGGGATGGAGAAAACTCTCATCTGCAAGAATCTCACGAAGCATGGCAAGAAGATGGTAGCTTCCAAGAGGCTGTGGAAAATTGGTTGGGAGGACCTTCAGATCATGAAAGTGCTCCAGCTGGTAGAATTCGAGGATTTTATTTTCCTGAAGATGACAATGTGTACAGTGTTGAACTCAGGGAACTTCTTAATAGGAGAAGTGTCTCTAACCTCCTTCGCAGCAGTTTCCGGGATAGTCTTGATCAGTTAATACAATCATATGTTGAAAGGCAAGGTAATGCACACATTGACTGGGAATTGCAAGAAACAAACCCCTCATCTGACTCAGCAGAGCAGGACCTTGAACAGCAAAGTAGAGATCAAATTGTTGATCAGGAGGGTCCTGTTAATAGTCCACTTGATCTGCCCTCTTTACCTATACCGCCTCCTCTGCCTCTGTGGGACCAGCACCACCACCATCGTGACAACTGGTCACAGAATGACATAAATAATCAGCGTCTAGGAATTGATTGGGAGATTGTGAATGACTTGAGAATTGACATGGCTCGATTGCAGCAAAGGATGAATAACATGCAGAGAATGCTAGAGGCTTGTATGGATATGCAGCTTGAGTTGCAGCGCTCTATAAGACAAGAAGTTTCTGAAGCCCTAAATCGCTCTGCTGATTCATCTGATATACATGATTGCGAGTCACCAGAAGATAAATCTAAATGGGATTGTGTGAGAAAAGGTCTTTGCTGTGTATGCCGCGAAAGCAATATCGATTCTTTGTTGTACAGATGTGGTCATTTGTGTACATGTTCAAAATGTGCCAATGAGTTGCTCCAAAGCAGGAAAAAATGTCCTATGTGTCAAGCTCCTGTGGTGGAGGTGATACGGGCTTACTCTATACAATAA 2589 0.4318 MAIAGLHSVSVLDSPFLRDSHSQSSRRGGEGRRGSTRSSSLLQMWREIEDEHVVNQVQGRPGEVPLEQRRGDGLIAELSQEDRLDIQERGQGHVLEDAVLGENESETWSQSQSQNEFHEDHEDLNNSSCENSSDLGEVERERVRQIFREWMNSGARDHVSNVSRRNSGSRREWLGETEQERVRIIREWVQMSSQQRSVSSGENREESSAEIGTQIERVRDGLIVNQNGGQNELSRRGIRKLCGRQAMLDMLKKAERERQREIEDLSVHRAVSQFPYRNRIQAFLRGRFLRNDRPVDNNRPLSVAESELGFLRRKQTVSGLREGFIARKENSGCSQATSNVSDTSSNVDIDLNTNEQMGSSSSHLVPIVHSELSDPNDRGSDGLGVSDSQRCVQGATSENLNWQESIGQVGDGMKHLPIESLDCQSSFSASVERVNNTEQNVDVMPTEYSANEITQQSLRIEESHHSNNQEFNEMHIEHSQLGDINSIENNSSNHDIHMDGNVVDDVNWNGSGALEVEQPEEAFENEGSEWYQNNTEWRNITEENADGNQLSNSANEWPENTSGNGDGENSHLQESHEAWQEDGSFQEAVENWLGGPSDHESAPAGRIRGFYFPEDDNVYSVELRELLNRRSVSNLLRSSFRDSLDQLIQSYVERQGNAHIDWELQETNPSSDSAEQDLEQQSRDQIVDQEGPVNSPLDLPSLPIPPPLPLWDQHHHHRDNWSQNDINNQRLGIDWEIVNDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSEALNRSADSSDIHDCESPEDKSKWDCVRKGLCCVCRESNIDSLLYRCGHLCTCSKCANELLQSRKKCPMCQAPVVEVIRAYSIQ* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01290 862 MobiDBLite consensus disorder prediction 545 569 - -
Phac11g01290 862 Pfam Zinc finger, C3HC4 type (RING finger) 807 854 - -
Phac11g01290 862 MobiDBLite consensus disorder prediction 545 582 - -
Phac11g01290 862 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 435 862 - -
Phac11g01290 862 Coils Coil 738 765 - -
Phac11g01290 862 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 795 860 IPR013083 -
Phac11g01290 862 SUPERFAMILY RING/U-box 809 855 - -
Phac11g01290 862 Coils Coil 244 264 - -
Phac11g01290 862 CDD mRING-HC-C3HC5_NEU1 810 859 - -
Phac11g01290 862 ProSiteProfiles Zinc finger RING-type profile. 810 849 IPR001841 -
Phac11g01290 862 MobiDBLite consensus disorder prediction 689 711 - -
Phac11g01290 862 MobiDBLite consensus disorder prediction 17 39 - -
Phac11g01290 862 MobiDBLite consensus disorder prediction 102 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01290 Phac-Chr11 9223886 9229266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01290 810 856 C3H Transcription Factor Family AT3G06140 40.426 1.48e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01290 - - gmx:100801329 1396.72