Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01255 ATGGGAAGAGCTCCATGCTGTGACAAGGCAAGTGTTAAGAAAGGGCCATGGTCACCAGAAGAAGACACAAAACTGAAGGAGTACATAGAGAAGCATGGAACTGGAGGGAATTGGATTGCTCTTCCTCAGAAAGCTGGTCTTAGGAGATGTGGGAAGAGTTGTAGATTGAGATGGCTCAACTATCTCAGGCCCAACATTAAGCATGGAGATTTCTCAGACGAGGAAGACAGAATAATTTGCAGCCTCTATGTTAATATTGGAAGCAGGTGGTCAATTATAGCTGCTCAGTTACCAGGAAGGACCGACAATGATATCAAGAACTACTGGAACACCAAGTTGAAGAAAAAGCTCATGGGGTTGCTTCCTCTTTCCCATCACAGAAAACAACTTTCATTTCCATCCTCTACCCTTCAAAACCCTCCACCCTCTCCTTCGTCTCACCAACTGTACGGAGAGTACGGCACCTACATCCCAGTAACAACATCTTTCACAGGCATGGAACATCTTTCCCTTCCTTCAGCTAACTATGAAAGCACAACAACCTCAGTTTCTCAAACCTTTTACCAAAACCAAGACTCCATGGCTAGCGTTAGTCCCATGCAATGCTATTACCCTATCAGTGACAGCATGCTCATGTTTGGAAGCGAAGGAAGTTGCAGTTCCTCCGATGGAAGCTGCACTCAGGGAAGAGAAATCAAGCTAGAAGAAATCGGGTACCACAGCTACAACCATAACTTGATGCTTAGTTACAACAATAACAACACTAACGATGGAGACAAGTCATGTGTCGGAGGGTGCTTCAGCCAAACGCAAACACCGTTGGATTATGATCTTGAGGATATTAAGCAATTGATTAGTAGCAGCAGCAGCAGCTTCAATAATAATGTTGATGAAAACAAGACAGAAGAGAAGGCGATGTACTGCTGCTACTACTAG 936 0.4434 MGRAPCCDKASVKKGPWSPEEDTKLKEYIEKHGTGGNWIALPQKAGLRRCGKSCRLRWLNYLRPNIKHGDFSDEEDRIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGLLPLSHHRKQLSFPSSTLQNPPPSPSSHQLYGEYGTYIPVTTSFTGMEHLSLPSANYESTTTSVSQTFYQNQDSMASVSPMQCYYPISDSMLMFGSEGSCSSSDGSCTQGREIKLEEIGYHSYNHNLMLSYNNNNTNDGDKSCVGGCFSQTQTPLDYDLEDIKQLISSSSSSFNNNVDENKTEEKAMYCCYY* 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01255 311 FunFam Transcription factor MYB36 70 139 - -
Phac11g01255 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Phac11g01255 311 Gene3D - 7 68 - -
Phac11g01255 311 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Phac11g01255 311 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Phac11g01255 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Phac11g01255 311 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Phac11g01255 311 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Phac11g01255 311 Gene3D - 70 136 - -
Phac11g01255 311 FunFam Transcription factor RAX3 7 68 - -
Phac11g01255 311 SMART sant 67 115 IPR001005 -
Phac11g01255 311 SMART sant 13 64 IPR001005 -
Phac11g01255 311 CDD SANT 16 62 IPR001005 -
Phac11g01255 311 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Phac11g01255 311 PANTHER OS09G0431300 PROTEIN 1 283 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac11g01255 Phac-Chr11 8920591 8923387 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01255 1 119 MYB Transcription Factor Family AT5G57620 89.076 1.47e-78 241
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac11g01255 Myb_DNA-binding 6e-15 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01255 K09422 - gmx:100779919 477.248