Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01252 ATGAATTCTGCAATGCATAAGTCCGGGTACTGTAGCGATGGAACATACCGGTCTCAAAGGCCTTCCTTGGTTCTCCCAAAGAACCCCAACCTCTCACTCGTTTCGTTTCTCTTCCAAAGTGTTTCTTCTTTTCCATCCAAACCCGCTCTCGTAGACGCCGACTCTTCCCAAACCCTCACCTTCGCGCAGCTAAAAGCCCGAGTCGCAACCCTCGCCCATGGTTTCCTCAAACTAGGCATAAAGAAAAACGACGTCGTACTCCTCCTCGCTCCCAACACCATCCACTTCCCCGTCTGCTTCCTCGCCGCCACTGCCATCGGAGCCATCGTCTCCACCGCCAACCCCATTTACACCGTCCACGAACTCTCCAACCAAGTCAAAGATTCCAACCCCAAGCTCCTGATCACTGTCCCTGAACTATGGGACAAAGCAAAGAACCTCAACCTCCCCGCCGTCATTCTTAGCACCAACAACCTTCAGAACCCAACTAAAAACGTGTCAGCGAAAATCACGAGTCTGGAAGCGGTGATGGAGATGGCGGGGCCGGTGACGGAGCTTCCGGAGAGCGGCGTTAAGCAGGGGGACACGGCGGCGCTGCTGTACTCCTCGGGGACCACGGGGCTGAGCAAAGGCGTGGTCCTGACGCATGGGAACTTTATCGCGGCGTCAGTGATGATCAGCATGGACGACGACCTGGCAGGGGAGGTAAACGACGTGTTCCTCTGTGTTTTGCCGATGTTCCATGTGTTCGGGCTGGCGGTTGTGACGTACACGGCGCTGCGGCGAGGGAGCGCGGTGGTGTCGATGGGGAAGTTCGAACTGGAGGCGTTTCTAAAAGCGATTGAGAAGCATAGAGTGACGAAGTTGTGGTTGGTGCCTCCGATCCTGCTTGCTATGGCGAAACAGAGTGTGGTCCAGAACTATGATCTGTCTTCGTTGAAGCGGATAGGTTCCGGTGCTGCTCCTTTAGGGAAAGAGTTGATGCAAGAATGTGGCAGGCGTTTTCCACATGTAGCTATTTGTCAGGGCTATGGAATGACAGAGACTTGTGGCATTGTTTCTATGGAGAATCCAAGAATGGGGATTCGTCATACTGGGTCGACGGGGATGCTGGCTTCGGGAGTGGAAGCTCAAATAGTGACTGTTGATACACAAAAGCCTCTCCCTCCTACACAGTCCGGGGAAATATGGGTGCGAGGTCCTAACATGATGAAAGGTTATCACAACAATCCACAGGCCACGAGATCGACTATAGATGAAAAGGGGTGGGTGCATACAGGAGATATTGGATATTTCGATGAAGAAGGACAACTTTATGTGGTTGACCGTATCAAAGAGCTAATCAAGTACAAAGGTTTTCAGAACAATATCTTACTGAACTATGAGCTGTTTAACAAGGTTGCACCAGCTGAACTTGAAGGCCTTCTCATTTCTCATCCTGAAATACTAGACGCTGTTGTTGTCCCATATCCCGATGATGAGGCTGGTGAGGTTCCAATTGCCTATGTTGTTCGCTCACCCAATAGTTCGCTGACTGAAGAAGAAATTAAGAACTTTATTGCTAATCAGGTTGCACCGTTCAAAAAATTGCGAAGGGTGACATTCATAAGTAGTGTTCCAAGGACATCTTCAGGAAAAATTCTTAGAAGAGAGATCACTGCGAAAGCACGATCCAAAATATAA 1683 0.5027 MNSAMHKSGYCSDGTYRSQRPSLVLPKNPNLSLVSFLFQSVSSFPSKPALVDADSSQTLTFAQLKARVATLAHGFLKLGIKKNDVVLLLAPNTIHFPVCFLAATAIGAIVSTANPIYTVHELSNQVKDSNPKLLITVPELWDKAKNLNLPAVILSTNNLQNPTKNVSAKITSLEAVMEMAGPVTELPESGVKQGDTAALLYSSGTTGLSKGVVLTHGNFIAASVMISMDDDLAGEVNDVFLCVLPMFHVFGLAVVTYTALRRGSAVVSMGKFELEAFLKAIEKHRVTKLWLVPPILLAMAKQSVVQNYDLSSLKRIGSGAAPLGKELMQECGRRFPHVAICQGYGMTETCGIVSMENPRMGIRHTGSTGMLASGVEAQIVTVDTQKPLPPTQSGEIWVRGPNMMKGYHNNPQATRSTIDEKGWVHTGDIGYFDEEGQLYVVDRIKELIKYKGFQNNILLNYELFNKVAPAELEGLLISHPEILDAVVVPYPDDEAGEVPIAYVVRSPNSSLTEEEIKNFIANQVAPFKKLRRVTFISSVPRTSSGKILRREITAKARSKI* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01252 560 FunFam 4-coumarate--CoA ligase 2 446 559 - -
Phac11g01252 560 Pfam AMP-binding enzyme C-terminal domain 471 546 IPR025110 -
Phac11g01252 560 SUPERFAMILY Acetyl-CoA synthetase-like 26 558 - -
Phac11g01252 560 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 445 - -
Phac11g01252 560 CDD 4CL 25 551 - -
Phac11g01252 560 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 553 - -
Phac11g01252 560 Pfam AMP-binding enzyme 39 450 IPR000873 -
Phac11g01252 560 Gene3D - 446 559 IPR045851 -
Phac11g01252 560 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Phac11g01252 560 Gene3D - 14 445 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01252 Phac-Chr11 8896531 8900301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01252 5 560 Monolignol Biosynthesis Gene Families AT4G05160 66.367 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01252 K01904 - gmx:100808944 894.034