Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01248 ATGGATATCTATCACCTTACGAGGGAGATTGAAGCCTCTGACATGTCTGCACTGGAAGCTGTCATAAGCTGTGACGAAGAAAGGTTGAAATTGGAGAAAGAAGCTGAACTTTTGGCTGCACAGGATGATGGAGGCGGTGAATCCCTGGAACGTGTTTATGAGCGATTGGATGCCCTAGATGCAGCAACTGCAGAAAAGCGTGCTGCTGAAATCTTACATGGTCTTGGCTTTGACAAGCAAATGCAGGCAAAAAAGACACGTGATTTTTCTGGTGGTTGGAGAATGAGAATTGCATTAGCACGAGCCCTATTCATGAACCCAACCATTCTTCTACTCGATGAACCAACCAATCATCTTGATTTGGAGGCTTGTGTGTGGCTGGAGGAGAGTTTGAAGAAGTTTGAACGTATTCTGGTTGTGATTTCACACTCTCAGGACTTTCTTAATGGTGTCTGCACAAATATTATCCACATGCAAAGCAAAAAACTGAAGCTATATACTGGTAACTATGATCAATATGTTCAGACACGTTCTGAGCTAGAAGAGAACCAGATGAAGCAGTATAAGTGGGAGCAGGAGCAGATTTCCTCAATGAAGGAATATATAGCTCGATTTGGTCATGGTTCTGCAAAACTAGCTCGCCAGGCACAGAGTAAGGAGAAAACATTGGCAAAAATGGAACGTGGTGGGCTTGCAGAGAAGGTGGTCAGGGACAAGGTTTTGGTATTCCGTTTTACTGATGTTGGAAAACTCCCCCCTCCTGTTCTCCAGTTTGTTGAGGTGGCATTCGGTTACACTCCCGATAACCTCATATACAAGAACATTGACTTTGGGGTTGATTTAGATTCTAGGGTCGCACTGGTTGGACCCAATGGTGCTGGGAAGAGTACACTACTGAAGCTAATGACAGGTGATTTGATGCCTAGTGATGGCATGGTTAGGCGTCATAATCATCTTCGGATTGCTCAATATCACCAGCATCTGGCTGAAAAGCTAGACTTGGAGATGTCTGCTCTACAGTATATGATTAGAGAATATCCTGGAAACGAGGAAGAGAAGATGAGGGCAGCGATTGGAAAGTTTGGTCTATCAGGTAAAGCCCAGGTGATGCCAATGAAGAACTTGTCTGATGGGCAGAGGAGTCGAGTGATATTTGCTTGGTTAGCTTGGAGGCAGCCGCAAATGCTTCTTTTGGATGAACCAACTAATCATTTGGATATTGAGACAATTGATTCTTTGGCTGAGGCATTGAATGAATGGGACGGTGGCTTGGTGCTTGTGAGCCATGATTTCAGGCTCATAAATCAGGTGGCCCATGAAATATGGATATGTGCTAATCAAAGTGTGACTAGATGGGAGGGTGACATTATGGAATTCAAGGCGCATCTAAAGGCCAAGGCTGGTTTATCTGATTGA 1416 0.4435 MDIYHLTREIEASDMSALEAVISCDEERLKLEKEAELLAAQDDGGGESLERVYERLDALDAATAEKRAAEILHGLGFDKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEESLKKFERILVVISHSQDFLNGVCTNIIHMQSKKLKLYTGNYDQYVQTRSELEENQMKQYKWEQEQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLAEKVVRDKVLVFRFTDVGKLPPPVLQFVEVAFGYTPDNLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLMPSDGMVRRHNHLRIAQYHQHLAEKLDLEMSALQYMIREYPGNEEEKMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAWRQPQMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWICANQSVTRWEGDIMEFKAHLKAKAGLSD* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01248 471 Gene3D - 220 469 IPR027417 -
Phac11g01248 471 Pfam ABC transporter 272 403 IPR003439 GO:0005524
Phac11g01248 471 Gene3D - 4 209 IPR027417 -
Phac11g01248 471 CDD ABCF_EF-3 89 162 - -
Phac11g01248 471 CDD ABCF_EF-3 256 447 - -
Phac11g01248 471 Pfam ABC transporter 22 117 IPR003439 GO:0005524
Phac11g01248 471 Coils Coil 163 183 - -
Phac11g01248 471 Pfam ABC transporter 156 232 IPR032781 -
Phac11g01248 471 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 256 471 IPR003439 GO:0005524
Phac11g01248 471 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 466 - -
Phac11g01248 471 ProSitePatterns ABC transporters family signature. 89 103 IPR017871 GO:0005524|GO:0016887
Phac11g01248 471 FunFam Abc transporter f family member 1 1 209 - -
Phac11g01248 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 240 450 IPR027417 -
Phac11g01248 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 192 IPR027417 -
Phac11g01248 471 SMART AAA_5 281 469 IPR003593 GO:0016887
Phac11g01248 471 FunFam ATP-binding cassette sub-family F member 3 216 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01248 Phac-Chr11 8790853 8794426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01248 256 443 Calmodulin-binding Proteins AT2G36910 24.771 9.52e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01248 K06185 - gmx:100809491 913.679