Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01224 ATGGCTTCTAAAACCCCACTCCCTCTTCAACCCACCAACACAAAGCTACCATCTCTAAGGTCAAAGAAAGATCGCCACACCAAGGTTAATGGCAGAGAACGACGTGTTCTTTTGCCACCTTTGTGTGCTGCTCGCATCTTCCAACTCACTCGTGAGCTAGGTTACAAGACTCACGGAGAAACCATAGGGTGGCTTCTACGCCAGGCTGAACCCTCCATTATTTCTGCAACTGGCACTGGGATATCACCTTCCATGGTGGATATAACATCATCATCACCATCTTCATCGTCACCATCGTCACTACCCATACTTCCACTACCTTCTGAGGGTGACAACGTTGTTGGTCAACATGCAAGTTCGGTACATTTGTCAACAGACAACGAGATCAATTCAAAAGAGACGTTTCCGCCTTTCGATTTTGATGTGTTTGCAAACTTTAATGTGGAATTTTCTGCTGCTGAGATCGAAATGCTCCAATCATTGATGACGAGGTTGGGCTGA 501 0.4611 MASKTPLPLQPTNTKLPSLRSKKDRHTKVNGRERRVLLPPLCAARIFQLTRELGYKTHGETIGWLLRQAEPSIISATGTGISPSMVDITSSSPSSSSPSSLPILPLPSEGDNVVGQHASSVHLSTDNEINSKETFPPFDFDVFANFNVEFSAAEIEMLQSLMTRLG* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01224 166 MobiDBLite consensus disorder prediction 1 29 - -
Phac11g01224 166 MobiDBLite consensus disorder prediction 1 17 - -
Phac11g01224 166 ProSiteProfiles TCP domain profile. 22 76 IPR017887 -
Phac11g01224 166 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 128 IPR005333 GO:0003700
Phac11g01224 166 Pfam TCP family transcription factor 21 117 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01224 Phac-Chr11 8531471 8532053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01224 23 101 TCP Transcription Factor Family AT5G08330 63.291 2.54e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac11g01224 TCP 1.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01224 - K16221 var:108322003 260.766