Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01199 ATGGCTTCTGATTGTTCAAGATTTGTGAGATTTCAAGATGACCCTGAATTGGTAAAATTGCCAACAACAAATAGTGGCAAGGGAATCAGGCGCAATGGAATACGATTAGTTGAAACAAGGGGTAAAAAGGGTCTGAAGGAGACAAGGAAGTTCTTGAAGGGTAGAGTATTGTCAAGAGTATTCTCAGAGGATTATGAGAGAGTTAGAAAAAAAACATTATTAGATCCCCGGGGACAAACCATTCACCGATGGAACAAAATTTTCTTGGTAGCATGTTTAGTTTCTTTATTTGTGGACCCTCTATTCTTTTATTTGCCACTAGTTCGAGATGAAGTGTGCATTGATATTGGAACAGCTCTTGAAGTTTTCCTCACAATGATAAGATCATTGGCAGATGTGTTTTACATGATTCAGATTCTCATGAAGTTTCGAACAGCTTATGTTGCTCCTTCTTCTCGTGTATTTGGGCGGGGAGAACTTGTCATAGACACTACCAAGATAGCTACTAGGTACCTGAGAAAGGGTTTTGGGCTAGACTTCATTGCTGCATTGCCTCTTCCTCAGGTGTTAATTTGGATTGTGATCCCCAATCTTGGAGGTTCAACCATGGCAAACACAAAGAATGTGCTTCGCTTTATCATCATTTTCCAATATTTACCAAGGCTGTTTCTGATTTTTCCACTTTCATCCCAAATTGTAAAAGCTACAGGAGTTGTGACAGAAACAGCATGGGCAGGGGCCGTTTACAACTTGGTTCTGTACATGTTGGCTAGCCATTTTTTAGGAGCTAGCTGGTACCTTCTATCAATTGAACGACAAGAAGCGTGCTGGAGAAGTGTCTGCGATATGGAGCCATCTTGCAAATATGGATTCTTTGACTGCAAAAGGGTTGAAGACTCCCTCAGGGTCTCCTGGTTTATAGCAAGTAATATCACAATTTTATGCTCACCAAAGGCTAACTTTTATCAGTTTGGTATATACGGTGATGCTGTGACATCCCAAGTTACTATCTCATCATTCTTTCACAAGTACTTCTTTTGTCTTTGGTGGGGCCTAAGGAATCTGAGTTCATTGGGACAAGGTCTTCTTACTAGCACTTTTGTTGGAGAAATAATGTTTGCCATTGTTGTTGCAACCCTTGGACTAGTTCTTTTTGCATTGCTTATTGGCAATATGCAGACATATCTCCAATCAACAACAGTTCGCTTAGAAGAGTGGAGGGTGAGGAGAACTGATACAGAACAATGGATGCATCACAGGCAACTACCCTCAGAACTTAGACAATCGGTGCGCAAATATAACCAATATAAATGGCTGGCCACACGAGGGGTAGATGAAGAAGCTCTTCTCAAAGGACTTCCTGCTGATCTTCGGAGGGACATCAAGCGCCACCTTTGTCTCGAACTAGTTCGACGAGTGCCACTGTTCGATCAAATGGACGAGAGAATGCTTGATGCAATTTGCGAGAGACTGAAGCCGGCACTGTGCACGGAGAACACATACCTAGTTCGCGAGGGCGATCCCGTGAACGAAACTCTCTTCATAATCAGAGGCCACCTGGATTCCTACACCACCAACGGAGGCCGCACCGGTTTCTTCAACTCGTGCCGCATAGGCCCCGGCGATTTCTGCGGCGAGGAGCTGCTCACATGGGCCCTGGGCCCACGGCCCAGCTTCATCCTCCCCTCCTCCACTCGAACTGTCAAGGCCATCTCCGAAGTGGAGGCCTTCGCCCTCATAGCCGAAGACCTCAAGTTCGTGGCATCACAGTTCAGAAGACTACACAGCAAACAACTGAGGCACAAGTTCAGGTTTTACTCGCACCAGTGGAGAACGTGGGCTGCATGTTTCATACAAGCTGCATGGAGACGCTATAAGAAGCGAAAGGAAGCTGCAGAACTGAGAGCTTTGAGCTACGTCCAGTCTAAGAGAGAGGGTGAGAGCGTAGGGTTGGTTGTGTATGGTACGAGGATGACTAGGAAGGGTACTGTGCATTCTGATGAAGTTGTCAACTCTTTGCAGAAGCCAGAAGAACCAGATTTTTCTGTTGGTGAGTGA 2058 0.4514 MASDCSRFVRFQDDPELVKLPTTNSGKGIRRNGIRLVETRGKKGLKETRKFLKGRVLSRVFSEDYERVRKKTLLDPRGQTIHRWNKIFLVACLVSLFVDPLFFYLPLVRDEVCIDIGTALEVFLTMIRSLADVFYMIQILMKFRTAYVAPSSRVFGRGELVIDTTKIATRYLRKGFGLDFIAALPLPQVLIWIVIPNLGGSTMANTKNVLRFIIIFQYLPRLFLIFPLSSQIVKATGVVTETAWAGAVYNLVLYMLASHFLGASWYLLSIERQEACWRSVCDMEPSCKYGFFDCKRVEDSLRVSWFIASNITILCSPKANFYQFGIYGDAVTSQVTISSFFHKYFFCLWWGLRNLSSLGQGLLTSTFVGEIMFAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVRRTDTEQWMHHRQLPSELRQSVRKYNQYKWLATRGVDEEALLKGLPADLRRDIKRHLCLELVRRVPLFDQMDERMLDAICERLKPALCTENTYLVREGDPVNETLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALGPRPSFILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRYKKRKEAAELRALSYVQSKREGESVGLVVYGTRMTRKGTVHSDEVVNSLQKPEEPDFSVGE* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01199 685 Gene3D Helix hairpin bin 402 466 - -
Phac11g01199 685 Gene3D - 87 399 - -
Phac11g01199 685 CDD CAP_ED 475 606 IPR000595 -
Phac11g01199 685 ProSiteProfiles cAMP/cGMP binding motif profile. 475 572 IPR000595 -
Phac11g01199 685 SUPERFAMILY cAMP-binding domain-like 405 601 IPR018490 -
Phac11g01199 685 SUPERFAMILY Voltage-gated potassium channels 75 397 - -
Phac11g01199 685 FunFam Cyclic nucleotide-gated ion channel 1 402 466 - -
Phac11g01199 685 Pfam Ion transport protein 84 402 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac11g01199 685 SMART cnmp_10 475 606 IPR000595 -
Phac11g01199 685 FunFam Cyclic nucleotide-gated ion channel 1 473 591 - -
Phac11g01199 685 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 65 681 - -
Phac11g01199 685 Gene3D Jelly Rolls 473 593 IPR014710 -
Phac11g01199 685 PRINTS EAG/ELK/ERG potassium channel family signature 139 148 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac11g01199 685 PRINTS EAG/ELK/ERG potassium channel family signature 256 266 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac11g01199 685 PRINTS EAG/ELK/ERG potassium channel family signature 388 397 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac11g01199 685 PRINTS EAG/ELK/ERG potassium channel family signature 344 361 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac11g01199 685 PRINTS EAG/ELK/ERG potassium channel family signature 370 381 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phac11g01199 685 PRINTS EAG/ELK/ERG potassium channel family signature 438 445 IPR003938 GO:0005249|GO:0006813|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01199 Phac-Chr11 8263261 8268345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01199 50 682 Ion Channels AT2G28260 77.129 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01199 K05391 - gmx:100791992 1234.55