Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01186 ATGGGTGGTTGGTTTTTTAATGTTTCTTTTGGAGGTGTTGCGAGTATGAAGGACTGGTTGTTTTTTGACAAGAGTTTTAATGGTTTGTCGGACGATATTCTTGATGATGTCATGGACATCGAGCTTTTCGATTTGCCCCTTGAAGATGTGGAAACTGACGATGGTATGGAACAAGATTGGGATGCTCAGTTCAAATTCATTGAAGAGCCTTCACTGGGAATTTTTCCTGTACAATCGTCTCAGCTCTGTGCTCGTACTCAAAATGAGATTGTGAAAGTCGAAACGGGTTTCTCTGCTTCTCCAGCGAAGACGGCGGGACCGGGACCTACATATAGCAAAAATATTCCTATTCAAAAAGTGTCTTTCAAAGGAAAAGATTTGCACCAATTCCAAACAAACAGCCCAGTTTCTGTTTTTGAAAGCAGTAGCAGTTCTCCCTCAGTTGAGAACTCTAACTTTGAGTTACCTGTTATCCCAACAAAGCGTCCCCGAAGCAAACGCAGGGCTCTCTCAAACATCACCCTGCTATACTCCATTCCTTTCATCTGCACTTCACCAGCTTTTCAAAAATTTCGAAGAACAGCTGTCTCAAAATCAGATTTAGAAACACAACCACTTGGGAAATTGTCAAGCATGGTAAAAAAGCAGAGGAAAAAGAATGTTCCTCTGCTAGCTAACAAAGAGATGAAGAGATCCTCATCAGAGGAATCAGTTGCAGTCAGAAAATGCTTGCATTGTGAGGTGACAAAGACACCACAATGGAGAGAGGGACCAATGGGTCCAAAGACCCTATGCAATGCTTGTGGAGTTCGGTACCGGTCTGGCCGGCTCTTTGCTGAATACCGGCCTGCAGCCAGCCCCACTTTTGTAGGATCATTGCACTCTAACTCTCACAAGAAGGTCTTAGAAATTAGGAACAGAGCACCCAGGTGA 933 0.4373 MGGWFFNVSFGGVASMKDWLFFDKSFNGLSDDILDDVMDIELFDLPLEDVETDDGMEQDWDAQFKFIEEPSLGIFPVQSSQLCARTQNEIVKVETGFSASPAKTAGPGPTYSKNIPIQKVSFKGKDLHQFQTNSPVSVFESSSSSPSVENSNFELPVIPTKRPRSKRRALSNITLLYSIPFICTSPAFQKFRRTAVSKSDLETQPLGKLSSMVKKQRKKNVPLLANKEMKRSSSEESVAVRKCLHCEVTKTPQWREGPMGPKTLCNACGVRYRSGRLFAEYRPAASPTFVGSLHSNSHKKVLEIRNRAPR* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01186 310 ProSitePatterns GATA-type zinc finger domain. 243 268 IPR000679 GO:0006355|GO:0043565
Phac11g01186 310 ProSiteProfiles GATA-type zinc finger domain profile. 237 273 IPR000679 GO:0006355|GO:0043565
Phac11g01186 310 FunFam GATA transcription factor 231 310 - -
Phac11g01186 310 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 241 298 - -
Phac11g01186 310 CDD ZnF_GATA 242 289 IPR000679 GO:0006355|GO:0043565
Phac11g01186 310 Gene3D - 238 287 IPR013088 GO:0006355|GO:0008270
Phac11g01186 310 PANTHER GATA TRANSCRIPTION FACTOR 57 307 - -
Phac11g01186 310 SMART GATA_3 237 287 IPR000679 GO:0006355|GO:0043565
Phac11g01186 310 Pfam GATA zinc finger 243 276 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01186 Phac-Chr11 8161662 8170454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01186 29 307 C2C2-Gata Transcription Factor Family AT1G08000 39.446 1.58e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac11g01186 GATA 6.2e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01186 - - gmx:100781869 410.223