Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01185 ATGAAGGAGGGTGAGAAGGTATTGGATCCGCAGCTATGGCACGCGTGTGCAGGTGGCATGGTTCAGATGCCGAAAGTGAACTCCAAAGTCTTCTACTTCCCACAGGGTCACGCCGAACACGCTCACACCAACATTGATCTCAGGGTTCCGCCACACATTCTCTGCAACGTCGAAGCCGTGAAGTTCATGGCGGACCCAGAAACCGACGAGGTCTTCGCCAAACTCAGTCTGGTTCCTCTCAGAAACTCGGAACTCGGTCCCGACTCGGAGGGGGGTGCTGACGCGGCGGAGGCTTCGGAGAAACCCGCGTCTTTCGCGAAGACTCTGACGCAGTCGGACGCCAACAATGGTGGCGGGTTTTCGGTGCCACGGTACTGCGCGGAGACGATTTTTCCGCGGCTGGACTACTCAGCGGAGCCGCCGGTGCAGACGGTGGTGGCGAAGGACGTGCAGGGGGAGACTTGGAGGTTCCGGCACATATACCGAGGGACGCCACGTCGACACTTGCTGACGACAGGGTGGAGCAGTTTCGTGAACCAGAAGAAACTGGTGGCTGGGGATTCTGTGGTGTTTCTGAGGTCTGAGAATGGAGAGTTGTGTGTTGGGATTCGGAGGGCAAAGAAGGGAATTGGGTGTGAGGTGTGGAACTCTGCTTCTGGTTCAGGGTCTGGAAGTGTAGGTGGAAGTGGGAATTGTGGGATTGGTCCTTATGGGCCTTTCTCTTTTTTCTTGAGAGAGGAGAGCAAGAGTTTAAGAAATGGTGGTGGTGGCGGTGGTGGGAATTTGAGTGGAAGGGCCAAAGTGAGGCCTGAGGCTGTTGTTGAAGCTGTGACACTGGCTGCTGGTAATAAACCTTTTGAGATTGTTTATTATCCAAGAGCTAGTACTCCTGAGTTTTGCATTAAGGCTTCTTCTGTGAGGGCTGCTATGAGGATTCAGTGGTGTTCTGGGATGAGGTTCAAGATGGCCTTTGAGACTGAGGATGCTTCAAGGATAAGTTGGTTCATGGGAACCATTGCTTCTGTTCAGGTGCTTGATCCCATCCGCTGGCCTAATTCCCCATGGAGGCTTCTTCAGGTAACTTGGGATGAGCCAGATTTGCTACAAAATGTGAAGCGTGTTAGCCCGTGGTTGGTTGAATTGGTATCAAACTTACCGGTCATCAATTTCACACCTTTCTCTCCACCAAGAAAGAAGCTGCGGTTTCCGCAGCACCCGGAGTTCCCCCTTGATGTTCAATTTCCAATACCAACGTTTTCAGGCAACCATCTCGGGCCTAACCACCCCTTGTGTGGTTTTTCGGATAACCCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAAATTGGATCATCACTATCAGATCTCCACCTTAACAAAAAACTGCAGTTGGGGTTGCTTCCATCTAATATCCACCAACTTGGAGTGTATAGTGGGATTTCAAATGGTAACACCACCACCAACCATGATAAGAGCAAAGAAAGCTTATCACACTTGCTGTCCATGGGGAAATCTAGCAATAGTTTGGAGAAACCTGACGATGTTAAGAAACATCAGTTTTTGCTCTTTGGTCAACCAATACTCACTGAGCAACAAATTTCTAGAGATGTGTTATCTCGTGGGAAAAAATCACCAGATGATGTTAAGGACAAAGAGAAGTGCGTTTTGGGTGACTCCCAATCTGCACTCTCACGGCAGTTTTCATCAGGGAAAGCTTCTGCTGCTGAGTTATCTTGGCAACTTGGCTTGGATACTGGTCATTGTAAAGTTTTCTTGGAGTCAGAAGATGTAGGAAGAACCCTAGACCTATCACGGCTTGGTTCTTATGAAGAACTGTATAGGAGACTTTCCTACATGTTTGGAGTTGAAAGATCTGAGATTCTGAATTATGTGTTCTACTATGATGCCAAAGGTGCTGTTAAGCAAACTGGTACCTAA 1938 0.4943 MKEGEKVLDPQLWHACAGGMVQMPKVNSKVFYFPQGHAEHAHTNIDLRVPPHILCNVEAVKFMADPETDEVFAKLSLVPLRNSELGPDSEGGADAAEASEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVVAKDVQGETWRFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSVVFLRSENGELCVGIRRAKKGIGCEVWNSASGSGSGSVGGSGNCGIGPYGPFSFFLREESKSLRNGGGGGGGNLSGRAKVRPEAVVEAVTLAAGNKPFEIVYYPRASTPEFCIKASSVRAAMRIQWCSGMRFKMAFETEDASRISWFMGTIASVQVLDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNLPVINFTPFSPPRKKLRFPQHPEFPLDVQFPIPTFSGNHLGPNHPLCGFSDNPPAGIQGARHAQIGSSLSDLHLNKKLQLGLLPSNIHQLGVYSGISNGNTTTNHDKSKESLSHLLSMGKSSNSLEKPDDVKKHQFLLFGQPILTEQQISRDVLSRGKKSPDDVKDKEKCVLGDSQSALSRQFSSGKASAAELSWQLGLDTGHCKVFLESEDVGRTLDLSRLGSYEELYRRLSYMFGVERSEILNYVFYYDAKGAVKQTGT* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01185 645 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 644 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac11g01185 645 Pfam Auxin response factor 276 359 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac11g01185 645 Gene3D - 584 644 - -
Phac11g01185 645 CDD B3_DNA 104 205 IPR003340 GO:0003677
Phac11g01185 645 SUPERFAMILY DNA-binding pseudobarrel domain 100 206 IPR015300 -
Phac11g01185 645 FunFam Auxin response factor 103 207 - -
Phac11g01185 645 Pfam B3 DNA binding domain 105 206 IPR003340 GO:0003677
Phac11g01185 645 Gene3D - 314 386 - -
Phac11g01185 645 FunFam Auxin response factor 314 387 - -
Phac11g01185 645 ProSiteProfiles B3 DNA-binding domain profile. 105 207 IPR003340 GO:0003677
Phac11g01185 645 ProSiteProfiles PB1 domain profile. 585 645 IPR000270 GO:0005515
Phac11g01185 645 SMART B3_2 105 207 IPR003340 GO:0003677
Phac11g01185 645 MobiDBLite consensus disorder prediction 485 511 - -
Phac11g01185 645 Gene3D - 103 207 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01185 Phac-Chr11 8121682 8125389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01185 1 645 B3 DNA Binding Superfamily AT4G30080 56.757 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac11g01185 B3 9.5e-23 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01185 - - gmx:100814686 1077