Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01184 ATGAAGGAGGGTGAGAAGGTATTGGATCCGCAGCTATGGCACGCGTGTGCAGGTGGCATGGTTCAGATGCCGAAAGTGAACTCCAAAGTCTTCTACTTCCCACAGGGTCACGCCGAACACGCTCACACCAACATTGATCTCAGGGTTCCGCCACACATTCTCTGCAACGTCGAAGCCGTGAAGTTCATGGCGGACCCAGAAACCGACGAGGTCTTCGCCAAACTCAGTCTGGTTCCTCTCAGAAACTCGGAACTCGGTCCCGACTCGGAGGGGGGTGCTGACGCGGCGGAGGCTTCGGAGAAACCCGCGTCTTTCGCGAAGACTCTGACGCAGTCGGACGCCAACAATGGTGGCGGGTTTTCGGTGCCACGGTACTGCGCGGAGACGATTTTTCCGCGGCTGGACTACTCAGCGGAGCCGCCGGTGCAGACGGTGGTGGCGAAGGACGTGCAGGGGGAGACTTGGAGGTTCCGGCACATATACCGAGGGACGCCACGTCGACACTTGCTGACGACAGGGTGGAGCAGTTTCGTGAACCAGAAGAAACTGGTGGCTGGGGATTCTGTGGTGTTTCTGAGGTCTGAGAATGGAGAGTTGTGTGTTGGGATTCGGAGGGCAAAGAAGGGAATTGGGTGTGAGGTGTGGAACTCTGCTTCTGGTTCAGGGTCTGGAAGTGTAGGTGGAAGTGGGAATTGTGGGATTGGTCCTTATGGGCCTTTCTCTTTTTTCTTGAGAGAGGAGAGCAAGAGTTTAAGAAATGGTGGTGGTGGCGGTGGTGGGAATTTGAGTGGAAGGGCCAAAGTGAGGCCTGAGGCTGTTGTTGAAGCTGTGACACTGGCTGCTGGTAATAAACCTTTTGAGATTGTTTATTATCCAAGAGCTAGTACTCCTGAGTTTTGCATTAAGGCTTCTTCTGTGAGGGCTGCTATGAGGATTCAGTGGTGTTCTGGGATGAGGTTCAAGATGGCCTTTGAGACTGAGGATGCTTCAAGGATAAGTTGGTTCATGGGAACCATTGCTTCTGTTCAGGTGCTTGATCCCATCCGCTGGCCTAATTCCCCATGGAGGCTTCTTCAGGTAACTTGGGATGAGCCAGATTTGCTACAAAATGTGAAGCGTGTTAGCCCGTGGTTGGTTGAATTGGTATCAAACTTACCGGTCATCAATTTCACACCTTTCTCTCCACCAAGAAAGAAGCTGCGGTTTCCGCAGCACCCGGAGTTCCCCCTTGATGTTCAATTTCCAATACCAACGTTTTCAGGCAACCATCTCGGGCCTAACCACCCCTTGTGTGGTTTTTCGGATAACCCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAAATTGGATCATCACTATCAGATCTCCACCTTAACAAAAAACTGCAGTTGGGGTTGCTTCCATCTAATATCCACCAACTTGGAGTGTATAGTGGGATTTCAAATGGTAACACCACCACCAACCATGATAAGAGCAAAGAAAGCTTATCACACTTGCTGTCCATGGGGAAATCTAGCAATAGTTTGGAGAAACCTGACGATGTTAAGAAACATCAGTTTTTGCTCTTTGGTCAACCAATACTCACTGAGCAACAAATTTCTAGAGATGTGTTATCTCGTGGGAAAAAATCACCAGATGATGTTAAGGACAAAGAGAAGTGCGTTTTGGGTGACTCCCAATCTGCACTCTCACGGCAGTTTTCATCAGGGAAAGCTTCTGCTGCTGAGTTATCTTGGCAACTTGGCTTGGATACTGGTCATTGTAAAGTTTTCTTGGAGTCAGAAGATGTAGGAAGAACCCTAGACCTATCACGGCTTGGTTCTTATGAAGAACTGTATAGGAGACTTTCCTACATGTTTGGAGTTGAAAGATCTGAGATTCTGAATTATGTGTTCTACTATGATGCCAAAGGTGCTGTTAAGCAAACTGGTGATGAACCCTTCAGGTATCATTTTTGTTTTCGTTTTTTTCATCTCAGCGTTAACTGA 1989 0.4907 MKEGEKVLDPQLWHACAGGMVQMPKVNSKVFYFPQGHAEHAHTNIDLRVPPHILCNVEAVKFMADPETDEVFAKLSLVPLRNSELGPDSEGGADAAEASEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVVAKDVQGETWRFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSVVFLRSENGELCVGIRRAKKGIGCEVWNSASGSGSGSVGGSGNCGIGPYGPFSFFLREESKSLRNGGGGGGGNLSGRAKVRPEAVVEAVTLAAGNKPFEIVYYPRASTPEFCIKASSVRAAMRIQWCSGMRFKMAFETEDASRISWFMGTIASVQVLDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNLPVINFTPFSPPRKKLRFPQHPEFPLDVQFPIPTFSGNHLGPNHPLCGFSDNPPAGIQGARHAQIGSSLSDLHLNKKLQLGLLPSNIHQLGVYSGISNGNTTTNHDKSKESLSHLLSMGKSSNSLEKPDDVKKHQFLLFGQPILTEQQISRDVLSRGKKSPDDVKDKEKCVLGDSQSALSRQFSSGKASAAELSWQLGLDTGHCKVFLESEDVGRTLDLSRLGSYEELYRRLSYMFGVERSEILNYVFYYDAKGAVKQTGDEPFRYHFCFRFFHLSVN* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01184 662 Gene3D - 103 207 IPR015300 -
Phac11g01184 662 FunFam Auxin response factor 314 387 - -
Phac11g01184 662 Gene3D - 314 386 - -
Phac11g01184 662 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 649 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac11g01184 662 CDD B3_DNA 104 205 IPR003340 GO:0003677
Phac11g01184 662 Pfam B3 DNA binding domain 105 206 IPR003340 GO:0003677
Phac11g01184 662 SUPERFAMILY DNA-binding pseudobarrel domain 100 206 IPR015300 -
Phac11g01184 662 Pfam Auxin response factor 276 359 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac11g01184 662 ProSiteProfiles B3 DNA-binding domain profile. 105 207 IPR003340 GO:0003677
Phac11g01184 662 FunFam Auxin response factor 103 207 - -
Phac11g01184 662 Gene3D - 584 659 - -
Phac11g01184 662 SMART B3_2 105 207 IPR003340 GO:0003677
Phac11g01184 662 MobiDBLite consensus disorder prediction 485 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01184 Phac-Chr11 8121682 8125389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01184 1 648 B3 DNA Binding Superfamily AT4G30080 56.845 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac11g01184 B3 9.9e-23 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01184 - - gmx:100814686 1084.71