Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01183 ATGAAGGAGGGTGAGAAGGTATTGGATCCGCAGCTATGGCACGCGTGTGCAGGTGGCATGGTTCAGATGCCGAAAGTGAACTCCAAAGTCTTCTACTTCCCACAGGGTCACGCCGAACACGCTCACACCAACATTGATCTCAGGGTTCCGCCACACATTCTCTGCAACGTCGAAGCCGTGAAGTTCATGGCGGACCCAGAAACCGACGAGGTCTTCGCCAAACTCAGTCTGGTTCCTCTCAGAAACTCGGAACTCGGTCCCGACTCGGAGGGGGGTGCTGACGCGGCGGAGGCTTCGGAGAAACCCGCGTCTTTCGCGAAGACTCTGACGCAGTCGGACGCCAACAATGGTGGCGGGTTTTCGGTGCCACGGTACTGCGCGGAGACGATTTTTCCGCGGCTGGACTACTCAGCGGAGCCGCCGGTGCAGACGGTGGTGGCGAAGGACGTGCAGGGGGAGACTTGGAGGTTCCGGCACATATACCGAGGGACGCCACGTCGACACTTGCTGACGACAGGGTGGAGCAGTTTCGTGAACCAGAAGAAACTGGTGGCTGGGGATTCTGTGGTGTTTCTGAGGTCTGAGAATGGAGAGTTGTGTGTTGGGATTCGGAGGGCAAAGAAGGGAATTGGGTGTGAGGTGTGGAACTCTGCTTCTGGTTCAGGGTCTGGAAGTGTAGGTGGAAGTGGGAATTGTGGGATTGGTCCTTATGGGCCTTTCTCTTTTTTCTTGAGAGAGGAGAGCAAGAGTTTAAGAAATGGTGGTGGTGGCGGTGGTGGGAATTTGAGTGGAAGGGCCAAAGTGAGGCCTGAGGCTGTTGTTGAAGCTGTGACACTGGCTGCTGGTAATAAACCTTTTGAGATTGTTTATTATCCAAGAGCTAGTACTCCTGAGTTTTGCATTAAGGCTTCTTCTGTGAGGGCTGCTATGAGGATTCAGTGGTGTTCTGGGATGAGGTTCAAGATGGCCTTTGAGACTGAGGATGCTTCAAGGATAAGTTGGTTCATGGGAACCATTGCTTCTGTTCAGGTGCTTGATCCCATCCGCTGGCCTAATTCCCCATGGAGGCTTCTTCAGGTAACTTGGGATGAGCCAGATTTGCTACAAAATGTGAAGCGTGTTAGCCCGTGGTTGGTTGAATTGGTATCAAACTTACCGGTCATCAATTTCACACCTTTCTCTCCACCAAGAAAGAAGCTGCGGTTTCCGCAGCACCCGGAGTTCCCCCTTGATGTTCAATTTCCAATACCAACGTTTTCAGGCAACCATCTCGGGCCTAACCACCCCTTGTGTGGTTTTTCGGATAACCCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAAATTGGATCATCACTATCAGATCTCCACCTTAACAAAAAACTGCAGTTGGGGTTGCTTCCATCTAATATCCACCAACTTGGAGTGTATAGTGGGATTTCAAATGGTAACACCACCACCAACCATGATAAGAGCAAAGAAAGCTTATCACACTTGCTGTCCATGGGGAAATCTAGCAATAGTTTGGAGAAACCTGACGATGTTAAGAAACATCAGTTTTTGCTCTTTGGTCAACCAATACTCACTGAGCAACAAATTTCTAGAGATGTGTTATCTCGTGGGAAAAAATCACCAGATGATGTTAAGGACAAAGAGAAGTGCGTTTTGGGTGACTCCCAATCTGCACTCTCACGGCAGTTTTCATCAGGGAAAGCTTCTGCTGCTGAGTTATCTTGGCAACTTGGCTTGGATACTGGTCATTGTAAAGTTTTCTTGGAGTCAGAAGATGTAGGAAGAACCCTAGACCTATCACGGCTTGGTTCTTATGAAGAACTGTATAGGAGACTTTCCTACATGTTTGGAGTTGAAAGATCTGAGATTCTGAATTATGTGTTCTACTATGATGCCAAAGGTGCTGTTAAGCAAACTGGTGATGAACCCTTCAGTGACTTCATGAAGACAGCGAAAAGATTGACAATTCTGACGGATTCAGGCAGCAAAAATGTTAAAAGGGCCTTTATTACAGGAACTCGGAATGGTGAACATGGACTTGATGCATCAAATAAAACAGGCCCTCTGAGCATATTTGCTTAA 2094 0.4881 MKEGEKVLDPQLWHACAGGMVQMPKVNSKVFYFPQGHAEHAHTNIDLRVPPHILCNVEAVKFMADPETDEVFAKLSLVPLRNSELGPDSEGGADAAEASEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVVAKDVQGETWRFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSVVFLRSENGELCVGIRRAKKGIGCEVWNSASGSGSGSVGGSGNCGIGPYGPFSFFLREESKSLRNGGGGGGGNLSGRAKVRPEAVVEAVTLAAGNKPFEIVYYPRASTPEFCIKASSVRAAMRIQWCSGMRFKMAFETEDASRISWFMGTIASVQVLDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNLPVINFTPFSPPRKKLRFPQHPEFPLDVQFPIPTFSGNHLGPNHPLCGFSDNPPAGIQGARHAQIGSSLSDLHLNKKLQLGLLPSNIHQLGVYSGISNGNTTTNHDKSKESLSHLLSMGKSSNSLEKPDDVKKHQFLLFGQPILTEQQISRDVLSRGKKSPDDVKDKEKCVLGDSQSALSRQFSSGKASAAELSWQLGLDTGHCKVFLESEDVGRTLDLSRLGSYEELYRRLSYMFGVERSEILNYVFYYDAKGAVKQTGDEPFSDFMKTAKRLTILTDSGSKNVKRAFITGTRNGEHGLDASNKTGPLSIFA* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01183 697 ProSiteProfiles PB1 domain profile. 585 665 IPR000270 GO:0005515
Phac11g01183 697 SUPERFAMILY DNA-binding pseudobarrel domain 100 206 IPR015300 -
Phac11g01183 697 Gene3D - 314 386 - -
Phac11g01183 697 Pfam Auxin response factor 276 359 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac11g01183 697 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 667 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac11g01183 697 CDD B3_DNA 104 205 IPR003340 GO:0003677
Phac11g01183 697 FunFam Auxin response factor 314 387 - -
Phac11g01183 697 Pfam B3 DNA binding domain 105 206 IPR003340 GO:0003677
Phac11g01183 697 Gene3D - 584 670 - -
Phac11g01183 697 ProSiteProfiles B3 DNA-binding domain profile. 105 207 IPR003340 GO:0003677
Phac11g01183 697 Gene3D - 103 207 IPR015300 -
Phac11g01183 697 SMART B3_2 105 207 IPR003340 GO:0003677
Phac11g01183 697 MobiDBLite consensus disorder prediction 485 511 - -
Phac11g01183 697 FunFam Auxin response factor 103 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01183 Phac-Chr11 8121682 8125389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01183 1 669 B3 DNA Binding Superfamily AT4G30080 57.246 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac11g01183 B3 1.1e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01183 - - gmx:100814686 1177.16