Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01159 ATGGCGTCCTCCAACACTCCCAAATCTCCCAAAGCCAAGAAAGGAGAAATCTCCACAACCCAATGTAAAACGAAGAAGAAGAATCGAGACATCGCGAAAGAGGAAAACCAAAAGAAGAAGAATAAGAAGCCCAAGCTCAGCAACGGCAATTCAAAACAGTCACACGAAAAGGGCGCAGAAGGAAGTGGTGAAGATGTGAAAACCAACGTGTTTCCAATGAATCGTATCAGGACCATGATCAAGGGCGAAGGTCCTGATATGCGTGTTTCGCAGGAAGCCGTGTTAACCATCAACAAAGCTGTGGAGAAGTTCCTTGAGCAATTTACGCAGGATGCATATGCTTGTTGTGTTCAGGACCGCAAGAAATGCCTGAGTTACAAGCACGTTGCAAATGTTGTTAGTAAGAAGATGAGATACGACTTTCTTTCCGATTTTGTTCCTGAGAAAGTGAAAGCCGAGGATGCATTAAGAGAGAGAAATGCAGCAGGCAATGGAGTATTTCAGAAAATCTAA 513 0.4386 MASSNTPKSPKAKKGEISTTQCKTKKKNRDIAKEENQKKKNKKPKLSNGNSKQSHEKGAEGSGEDVKTNVFPMNRIRTMIKGEGPDMRVSQEAVLTINKAVEKFLEQFTQDAYACCVQDRKKCLSYKHVANVVSKKMRYDFLSDFVPEKVKAEDALRERNAAGNGVFQKI* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01159 170 Gene3D Histone, subunit A 12 148 IPR009072 GO:0046982
Phac11g01159 170 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 71 133 IPR003958 -
Phac11g01159 170 MobiDBLite consensus disorder prediction 18 42 - -
Phac11g01159 170 MobiDBLite consensus disorder prediction 1 17 - -
Phac11g01159 170 SUPERFAMILY Histone-fold 47 142 IPR009072 GO:0046982
Phac11g01159 170 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 36 164 - -
Phac11g01159 170 MobiDBLite consensus disorder prediction 1 71 - -
Phac11g01159 170 Coils Coil 22 42 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01159 60 129 CCAAT-HAP5 Transcription Factor Family AT1G07980 42.857 3.33e-16 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phac11g01159 CBFD_NFYB_HMF 6.9e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01159 - K03506 gmx:100793738 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g01159 11 7788190 7798979 Phac11g01159 11 7788190 7798979 ECH