Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01148 ATGGGGAAGAAGAAGCAGAAAATCGTTCTTCCGCCGGAGCTTCCACCAGAGATCCCAGAGGATGAAGTTGAGGTTTCCGACGATGACCTCCAATTCATTAAAGAGAATCGCAGCTATGCCTCCTTGCTCTCCACCTTGGACACCCATTCAATCACCAAGCATGTTACACGGGTTGCTGATGCCAAAGATGATGCATTGGAAAAACTTTATGAGAAACGCATGCAAAAGAATGCTCTCAAGAAAGAAAAAGAAGAAACTAGTTTGCAGGTTGATCGTGCAGATGCTCTTCCAATCAAGACATTGGATGGAAAACTCCATTACCGGACAGCTACAAAGACAGTATCAGAAAATGATCTAAGTGAAGAGGGATCTGCAGAGGATGTCAATGCAGATGATGGTATGGTGAAGCTAACTAAGGCTGAAAAGAGAGCCAAACTTAAGAAAATGAAAAAAGAGGCCAAAAAACAAGGGAAAGAAGTGGCTAAAACAGAAGTGGAAGATACACCACAAGCAGCAGTGCTGGCTGAGATAAAAGAAGATCTTACAGCTGAGGAGGCATTTGAAAGTAAGAAGTGTAAACTTGCTGAATTGGGGAGTGCCTTGCTTACAGATCCAGAGTCCAATATTAAACTTCTGAAAGAGATGGTGCAGATATCTAAAGATAATAATCATACCATTGTTAAACTAGGACTTCTATCCCTCTTGGCTGTTTTCAAAGATATTATACCCGGTTATCGGATCAGGCTTCCTACTGAAAAGGAACTAGAAATGAAGGTTTCAAAGACTGTAAGAAAGATGCGATATTATGAGTCAACTCTTCTTTCAGCGTACAAGGTGTACTTGCAAAGATTGATGGCCTTAGAGAATAAGCCTCTATTTCAGCATGTAGCAGTTCGTTGTATTTGTTCTTTGCTTGATGCTAATCCCCATTTCAACTTCCGGGAAAGTTTGTTGGACGCTACTGTCAGAAACATAAGCTCTACTGATGAGGCTATAAGGAAGCTTTGTTGTTCAACAATTAAATCACTCTTTACAAATGAAGGGAAACATGGGGGTGAAGTTACCCTGGAGGCTGTTCGATTGATTGCTGATCATGTTAAAGCTCATAATTGTCAATTTCACCCAGATTCTGTTGATGTTTTCTTGTCCCTTTCATTTAATGAGGATCTCTTGAAGTATGAAAAGAAAGAAGAGGATCAGAAATTAAAAAACAAGAATAGTAAGAAAAGGAAAAACATGGAGGCATCAAATCAGTTGGTGGAAAATGATAGAAAGAAAAGTAGGCAAGAATCGATTTCCAAAACAAGAGAGGAGGTTGAAGCCGATTACAAGGCTGCATCCTTTGCCCCAGATGTTATGGAGAGAAGACAGATGCAAACTGCAACACTCTCAGCTGTCTTTGAGACATACTTTCGCATTTTGAAGCATACAATGGAGTCCATAGGTGTCAGGCCTGAAGCAAATGCCGGGGCATTATCTACTGCAGTGGAACCTCTCCCTTTGCTTGCTCCATGTCTGAAAGGACTGGCAAAATTTTCACATCTTATTGACCTTGATTTCATGGGTGATTTAATGAACCATCTGAAAGCACTTGCTTCTGGAAGTAGCTTCTCAGGCAACACTTCTGACAAGTGTTCTAAATGTTTGACCGTATCGGAACGTCTCCAATGTTGCATAGTTGCTTTTAAAGTGATGCGGAACAATCTTGATGCCTTAAATGTTGATTTACAGGATTTCTTTATCCACCTTTACAATCTTGTACTTGAATACAATCCTGGAAGAGATCAAGGAGAGGTTTTGGCAGAAGCTTTGAAGATAATGTTGTGCGATGATAAGCAACATGACATGCAAAAGACTGCTGCATTTATAAAAAGATTAGCAACAATATCACTGTGTGTTGGATCAGCAGATTCCATGGCTGCCTTGGTCACCGTAAAGAATCTCCTTCAGAAGAATGTTAAGTGCAGAAATTTGTTGGAAAATGACATTGGAGGGGGCTCTGTTTCTGGCACAATTCCTAAATATCTACCATATTCCACAGACCCCAATTTAAGTGGCGCCCTTGCCTCAGTACTTTGGGAACTCAATCTTTTGTCCAGCCATTATCATCCAGCCATATCAACGCTGGCCTCGGGCATTTCAAGTATGAGTACTGCACATAACCAGGTCCTTTTATCCAAGACCTCTCCTCAGCTAGCTTATAAGGAAATGTCTCTGGACCAGGAATTATGTTTCACACAACAAAGTGGCAGTATAAAATTAAAGAACAAGCGGAGACGAACAAATGACCCTGCTACATCACCTTCCATTGGTTCTACAACTGCAGTGAGTTCATTTGATGACAATGAGTTGCAGAGGAAACTTATTTCCCATTTTATGGTTCATCATGACATCAAGGAGAATGAAAGGTTGAGAAAGGAGCTGGACAGGACTGCACTATCGCTACAGCTATATGAACAATATAAGAAACAAAAGAAACAAAAGAAACGATCATAG 2496 0.4062 MGKKKQKIVLPPELPPEIPEDEVEVSDDDLQFIKENRSYASLLSTLDTHSITKHVTRVADAKDDALEKLYEKRMQKNALKKEKEETSLQVDRADALPIKTLDGKLHYRTATKTVSENDLSEEGSAEDVNADDGMVKLTKAEKRAKLKKMKKEAKKQGKEVAKTEVEDTPQAAVLAEIKEDLTAEEAFESKKCKLAELGSALLTDPESNIKLLKEMVQISKDNNHTIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKVYLQRLMALENKPLFQHVAVRCICSLLDANPHFNFRESLLDATVRNISSTDEAIRKLCCSTIKSLFTNEGKHGGEVTLEAVRLIADHVKAHNCQFHPDSVDVFLSLSFNEDLLKYEKKEEDQKLKNKNSKKRKNMEASNQLVENDRKKSRQESISKTREEVEADYKAASFAPDVMERRQMQTATLSAVFETYFRILKHTMESIGVRPEANAGALSTAVEPLPLLAPCLKGLAKFSHLIDLDFMGDLMNHLKALASGSSFSGNTSDKCSKCLTVSERLQCCIVAFKVMRNNLDALNVDLQDFFIHLYNLVLEYNPGRDQGEVLAEALKIMLCDDKQHDMQKTAAFIKRLATISLCVGSADSMAALVTVKNLLQKNVKCRNLLENDIGGGSVSGTIPKYLPYSTDPNLSGALASVLWELNLLSSHYHPAISTLASGISSMSTAHNQVLLSKTSPQLAYKEMSLDQELCFTQQSGSIKLKNKRRRTNDPATSPSIGSTTAVSSFDDNELQRKLISHFMVHHDIKENERLRKELDRTALSLQLYEQYKKQKKQKKRS* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01148 831 Coils Coil 821 831 - -
Phac11g01148 831 PIRSF Noc3 1 830 IPR016903 -
Phac11g01148 831 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 819 IPR016903 -
Phac11g01148 831 MobiDBLite consensus disorder prediction 397 438 - -
Phac11g01148 831 SUPERFAMILY ARM repeat 205 651 IPR016024 -
Phac11g01148 831 MobiDBLite consensus disorder prediction 1 23 - -
Phac11g01148 831 Coils Coil 66 96 - -
Phac11g01148 831 Coils Coil 139 166 - -
Phac11g01148 831 Pfam CBF/Mak21 family 555 710 IPR005612 -
Phac11g01148 831 Pfam Nucleolar complex-associated protein 190 280 IPR011501 -
Phac11g01148 831 Coils Coil 410 430 - -
Phac11g01148 831 MobiDBLite consensus disorder prediction 753 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01148 Phac-Chr11 7703065 7713769 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01148 1 808 Core DNA Replication Machinery Family AT1G79150 57.998 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01148 K14834 - gmx:100776136 1364.75