Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01120 ATGCATAAAGTGGATAGTGCAGAAAAAGACAATGTGTGGATTCAGGGTTGTGCTACCATCAAGGAAAGATCTATGGCAGGAGGTTCTGGAACTAAAGTTTCAAAAATGTGGGCTAAGAAGAATGCTGGTGGAAAAGAACAGGTGGCAAAATTAGTTGATGATACATATAGGAAAATGAAGATATCTGGGGCCACTGATCTAGCATCTAAGGGTCAGGGAGCATCAGATAGCAGTAGTGTAAAGGTGAAAGGTGAAATTGATGATTCCTTCCAACCAGAAACAAAGATTCGCTGTTTATGTGGAAGTAGATTGGAAACAGGGGATTTGGTCAAGTGTGATGATCGAAGATGCCAGGTGTGGCAACACATCAGTTGCGTTATTATTCCAGAGAAACCTGCAGAAGGCATCCCACCGGTTCCTGATAAGTTTTATTGTGAACTATGTCGGCTAAATCGTGCTGACCCATTTTGGGTTGCAGTGGCACACCCTTTGCTTCCCGTGAAGTTAACAACAACGAGCAATCCAACTGATGGAACCAACCCTGTGCAGAGTGTGGAAAGAACATTTCAACTTACTAGAGCAGACAAGGACTTGGTTTCCAAACCAGAAGTTGATGTTGAGGTTTGGTGTATGCTCCTAAACGACAAGGTCCCATTCAGGATGCAATGGCCACAATATACAGACCTGCAGGTCAATGGTGTTCCTGTTCGAGCAACTAACAGACCTGGTTCCCAGTTGCTTGGAGCTAATGGGCGGGATGATGGTCCAATTATCACACCATACACAAAAGACGGAATTAATAAGATTTCCTTAACAGGATGTGATGCTCGCATTTTTTGTCTAGGGGTTCGTATTGTTAGAAGGCGTAACATGCAGCAGATCCTAAACTTAATTCCAAAGGAGTCTGATGGTGAGCGATTTGAAGACGCTCTTGCACGTGTGTGTCGTTGTGTTGGGGGTGGAAACACAGATGGTGATGCTGATAGTGACAGTGATTTGGAAGTCGTTTCAGATACTTTCAGTGTCAACCTTCGCTGTCCTATGAGTGGTTCAAGAATGAAGATTGCTGGAAGATTCAACCCTTGTATTCACATGGGTTGCTTTGACCTTGAGGTTTTTGTGGAAATGAATCAACGATCAAGGAAGTGGCAATGTCCTATATGTCTCAAAAACTATGCTTTGGAGAATATTATCATTGATCCTTATTTCAATCGCATCACTTCTATGATGTTAAATTGTGGTGAAGAAATTACAGAGGTTGAGGTGAAGCCTGATGGTTCTTGGCGTGTGAAGACAAAGAGTGAAAGTGAACGCCAGGAATTAGGGAGTCTAGCACAGTGGCATCTTCCTGATGGATCCCCATGCGTTTCAGCTGATGGAGATTTCAAGAGAGTGGATACATTGAAGCAGGTCAAACAGGAAGGTGTTTCTGACAGTCCAACTGGTTTAAAACTTGGCATCAGGAAGAATCGCAATGGAGTTTGGGAAGTCAGTAAACCTGAGGGCACAAACACCTCTTCTGGTAATAAATTGAAAGGGGTTTTTGGAAATCCTGAACAGGTTGTTATTCCAATGAGCAGTAGTGCTACTGGAAGTGGCCGAGATGGTGACGATCCTAGTGTAAATCAGGGTGGTGGTGGGAATATCGACTATTCTGCTGCAACTGGCATTGAAATAGATTCTCTGTGTCTCAATAATGTTGATTTAGCATATGAATATACTGCACATGACACTTCTGCTCAGGCGGGTGGTACAGAAGTTATTGTTCTTAGTGATTCTGAAGAAGACAATGATCTTTTGGTATCGCCTCCGATTGCGTATAGGAACAACCAAAATGATGCTACAGATGGTTATTCTGTACAACCACCTGTAATAGTTGATTCATATACTGAAGATCATAATCTTGTTGGTGGAAATTCATGCTTAGGACTCTTTCCCAATGATGATGATTTTGGGATGTCTTCCCTGTGGTCTATGCCTTCTGGAAGTCAGGCTGGTCCTGGATTCCAACTATTTGGTTCCGATGCAGATGTGTCAGATGCATTGGTCCATCTGCAACATGGTCCTGTGAATTGCTCTTCATCACTAAATGGTTATGCACTAGCTCCTGATACTGCTTTGGGATCTGGTAGTATCTTGCATGATTCCTCTGCTGGTCGGTTGGATGCTGATTTGAATGGTGGTTTGGTGGACAATCCATTAGCATTTGGTGGTGATGATCCCTCACTTCAGATTTTTCTCCCCACTAGACCAGCGGACTCATCCATTCAGAATGAATTGAGAGATCAGGCAAATGTGGCTAATGGTGTCTGCACTGAAGAGGATTGGATATCCCTTAGTCTTGGAGGTGGTGCTGGTGGTAGCAATGGTGATGCTTCTACTCAAAATGGATTGAATTCTAGACATCAAATCCCAACCAGAGATGTTGGCACAAATACTTTGGATGATACTGCTTCTTTACTCCTTGGGATGAATGATGTTAGATCTGACAGGCCAAGTAGGCAAAGGTCAGATAGTCCTTTCTCATTTCCTCGCCAAAGACGTTCTGTAAGACCCCGTTTGTACCTTTCTATTGATTCGGATTCAGAGTAA 2592 0.4321 MHKVDSAEKDNVWIQGCATIKERSMAGGSGTKVSKMWAKKNAGGKEQVAKLVDDTYRKMKISGATDLASKGQGASDSSSVKVKGEIDDSFQPETKIRCLCGSRLETGDLVKCDDRRCQVWQHISCVIIPEKPAEGIPPVPDKFYCELCRLNRADPFWVAVAHPLLPVKLTTTSNPTDGTNPVQSVERTFQLTRADKDLVSKPEVDVEVWCMLLNDKVPFRMQWPQYTDLQVNGVPVRATNRPGSQLLGANGRDDGPIITPYTKDGINKISLTGCDARIFCLGVRIVRRRNMQQILNLIPKESDGERFEDALARVCRCVGGGNTDGDADSDSDLEVVSDTFSVNLRCPMSGSRMKIAGRFNPCIHMGCFDLEVFVEMNQRSRKWQCPICLKNYALENIIIDPYFNRITSMMLNCGEEITEVEVKPDGSWRVKTKSESERQELGSLAQWHLPDGSPCVSADGDFKRVDTLKQVKQEGVSDSPTGLKLGIRKNRNGVWEVSKPEGTNTSSGNKLKGVFGNPEQVVIPMSSSATGSGRDGDDPSVNQGGGGNIDYSAATGIEIDSLCLNNVDLAYEYTAHDTSAQAGGTEVIVLSDSEEDNDLLVSPPIAYRNNQNDATDGYSVQPPVIVDSYTEDHNLVGGNSCLGLFPNDDDFGMSSLWSMPSGSQAGPGFQLFGSDADVSDALVHLQHGPVNCSSSLNGYALAPDTALGSGSILHDSSAGRLDADLNGGLVDNPLAFGGDDPSLQIFLPTRPADSSIQNELRDQANVANGVCTEEDWISLSLGGGAGGSNGDASTQNGLNSRHQIPTRDVGTNTLDDTASLLLGMNDVRSDRPSRQRSDSPFSFPRQRRSVRPRLYLSIDSDSE* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01120 863 ProSiteProfiles Zinc finger SP-RING-type profile. 329 412 IPR004181 GO:0008270
Phac11g01120 863 MobiDBLite consensus disorder prediction 496 515 - -
Phac11g01120 863 MobiDBLite consensus disorder prediction 787 819 - -
Phac11g01120 863 MobiDBLite consensus disorder prediction 782 863 - -
Phac11g01120 863 SUPERFAMILY FYVE/PHD zinc finger 90 152 IPR011011 -
Phac11g01120 863 ProSitePatterns Zinc finger PHD-type signature. 98 148 IPR019786 -
Phac11g01120 863 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 320 430 IPR013083 -
Phac11g01120 863 SMART PHD_3 97 149 IPR001965 -
Phac11g01120 863 CDD PHD_Bye1p_SIZ1_like 97 148 - -
Phac11g01120 863 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 32 645 - -
Phac11g01120 863 Pfam PHD-finger 97 149 IPR019787 -
Phac11g01120 863 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 154 IPR013083 -
Phac11g01120 863 Pfam MIZ/SP-RING zinc finger 342 390 IPR004181 GO:0008270
Phac11g01120 863 CDD SP-RING_Siz-like 343 392 IPR031141 -
Phac11g01120 863 MobiDBLite consensus disorder prediction 524 547 - -
Phac11g01120 863 MobiDBLite consensus disorder prediction 497 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01120 Phac-Chr11 7495159 7506784 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac11g01120 PHD 2.1e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01120 - - gmx:100793735 1509.58