Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01100 ATGGAGAGCAGTGACACATACACCCCTGGTTCCTCTGCCCCACTTTCTCACTCCCCCACTTCCTCTTCTTCCTCACCACCACCTCCCACAGTTGTGATGACCCCTTGTGCTGCATGCAAGATTTTGAGGAGAAGATGTGCTGACAAATGTGTTCTGGCACCTTATTTTCCTCCCACTGAACCTGCCAAGTTCACCATTGCTCACCGTGTCTTTGGTGCCAGCAACATCATCAAGTTCCTACAGGAACTTCCAGAGTCTCAGAGGGCTGATGCAGTGACCAGCATGGTTTATGAGGCTAGTGCAAGAATAAGAGACCCTGTTTATGGTTGTGCAGGAGCAATTTGCCAGCTCCAGAAGCAAGTGAATGAACTTCAAGCACAATTGGCAAAGTCACAAGCTGAGCTTGTAACCATGCAACTTCAGCAAGCCAATCTTGTGGCTCTAATTTGCATGGAGATGGCACAGAGTCCACAGGAATCACCACAACAATCAGTGGACGATTTCATTTCAACTCCTCCTCACAGTGGTGGCTATCAAAGTGGCATGAACTTCTTTGAGGAGAACACTAGCCCAAACTCACTATGGGAGCCCCTTTGGACTTGA 603 0.4859 MESSDTYTPGSSAPLSHSPTSSSSSPPPPTVVMTPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVTSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKSQAELVTMQLQQANLVALICMEMAQSPQESPQQSVDDFISTPPHSGGYQSGMNFFEENTSPNSLWEPLWT* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01100 200 Pfam Lateral organ boundaries (LOB) domain 35 132 IPR004883 -
Phac11g01100 200 ProSiteProfiles LOB domain profile. 34 135 IPR004883 -
Phac11g01100 200 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 34 159 - -
Phac11g01100 200 MobiDBLite consensus disorder prediction 1 20 - -
Phac11g01100 200 MobiDBLite consensus disorder prediction 1 30 - -
Phac11g01100 200 Coils Coil 114 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01100 Phac-Chr11 7385020 7386989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01100 31 200 AS2 family AT2G28500 66.486 1.21e-78 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac11g01100 LOB 2.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01100 - - gmx:100789504 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g01100 11 7385020 7386989 Phac11g01100 11 7385020 7386989 ECH
Phac5g02069 5 40411524 40413455 Phac11g01100 11 7385020 7386989 PCT