Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01088 ATGTTAAATTTTGATGTCACCAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTGTATTTGCAAAAACACAGATTCAGGAGGCACTGCAACGTGCAACTTTTGACAGCAATTCTGAGGTTGGCATAATATTTCATTCAATGGATGCACTGGAATCACCACCTACATATTTTAGGACCAACAGTTTCACAGGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCGGCAGTTTATACAACTATTATATTCCCTTTTCTTTTCGCGGTGATGTTTGGCGATTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTGGTTCTTATAGCACGTGAGAACAAGCTCAGCACCCAGAGATTTCAAGGACGCACTTACGGTGTGCTTCATACCTCTGAGGTTGATCTTGAGTTGGAACCAGGTTCTGCCAGGCAACATGACGATGACTTCAATTTCACAGAGGTCTTCGTTCACCAAATGATTCATTCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACGGCCTCATATCTACGACTTTGGGCATTAAGGTTTGGTCAGCTATGA 585 0.4239 MLNFDVTKKCLVGEGWCPVFAKTQIQEALQRATFDSNSEVGIIFHSMDALESPPTYFRTNSFTGPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIARENKLSTQRFQGRTYGVLHTSEVDLELEPGSARQHDDDFNFTEVFVHQMIHSIEFVLGSVSNTASYLRLWALRFGQL* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01088 194 Pfam V-type ATPase 116kDa subunit family 148 189 IPR002490 GO:0033179|GO:0046961|GO:1902600
Phac11g01088 194 Pfam V-type ATPase 116kDa subunit family 1 125 IPR002490 GO:0033179|GO:0046961|GO:1902600
Phac11g01088 194 PANTHER VACUOLAR PROTON ATPASES 145 189 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01088 Phac-Chr11 7284553 7295792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01088 121 189 Primary Pumps ATPases(2) AT2G28520 73.611 1.60e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01088 K02154 - gmx:100800799 252.292