Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01078 ATGCCTATTTTGTCTGGAATAGGTCTTTTATGCAAGATCATGAACCACAAAACTCTGAAGAATATCCCTGTGATTATGATGTCGTCTCACGATTCTATGGGTATTGTCTTTAAGTGTTTGTCAAAAGGCGCTGTTGATTTTTTAGTGAAACCTATTCGGAGGAATGAACTTAAGAATCTTTGGCAGCATGTCTGGAGAAGATGCAACAGTGTGAGTTGA 219 0.3836 MPILSGIGLLCKIMNHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHVWRRCNSVS* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01078 72 Pfam Response regulator receiver domain 1 59 IPR001789 GO:0000160
Phac11g01078 72 ProSiteProfiles Response regulatory domain profile. 1 65 IPR001789 GO:0000160
Phac11g01078 72 SUPERFAMILY CheY-like 1 69 IPR011006 -
Phac11g01078 72 Gene3D - 1 71 - -
Phac11g01078 72 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 68 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01078 Phac-Chr11 7094133 7098330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01078 1 69 Response Regulator Gene Family AT5G60100 85.507 3.63e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac11g01078 Response_reg 5.1e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01078 K12129 - pvu:PHAVU_011G070700g 147.902