Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01075 ATGCAGAGTTCGTGGACTAAATGTCTGGCTCAAGTTGGCAGTCCACGTCCAGTTTCACCTCATAAACAATTGGTTGATGCCCCAGATAGCACTTGTGCCCAAGTGATGCAAACAAAGACTGAAAAAGTTAGTAGTAGATGGGTGCATGCAACAGAAAAAGAGTGCCTTGAACTTATTGATCATCTTGATGATGTTGCAATGGGCAAGGACTTGGCTGTGGGAATATCTTTGAATATGCAACTAGATCATCGACTTGAGGAACTTTCTAGCCATCCAATGGGTAAAGGGGCAAATAAAATGTCTGATGTTGATAATATGCAGATAGTTAAAGGACAGGGTAATGTCTGTGAAAATGCACAACTGGAGTACAATGGTGGTAAAACCAGGACACAGGAAAATCAAACTATGAATGTTATCGATTTTACTGATAGCAATAGTCCACAGGCTGAAAGCAGAGACTTGAACACTCCAAATGGGTTTTCTGGTTTCTCACTAACAAAAGAAAACTGTTGCCCCAAAGAGCATCCATCCCTGGAACTAACTTTGAAAAGGCTTGGAGAAGTAAGAGATGCTAAAAATGTCACGGGTGAAGAATGCAATGTGTTGAGACATTCAGACCAGTCAGCATTCTCAAAATATAATACTGCTTCTTCTGCTAACCAGGCTCAAACCGGAAATGTAGGAAGCTGTTCCCCACTAGCCAATGGCTCAGCTGCACCAAATGCAGAGGTAATACACAACTTTCCATCTCACTCAAATGTCACTCCTCCAAACCAACAATCTAATGGAAGCAACAACATCAATGACATGGCCTCCACTAATACATATCTTGGGACCAAACCTTGTACTTTTGACAAGATGCCAGAGTCTGTAAGAGGGATGGGCTCATTTAATTCCTCTGAACTCCAAACTTTACCGAACAATGGTATCTCATCATCTCAGAAGAAAACTTTTGCCCGGGAAGAATATATGGAAATTGTTAGAGGACAAATGGGAGGCTCTGAACATGAATTCCAAGTCGAGCACACTCATTATGAGCTTCAACATTATAATCACATTTCCCATAAAGCTACTGTAGATCTCCAATCAGATCATGATCTCTTACTCAAAAGCTCGCCCAACACTGCTCAGCAATGTGTATCATCAAATGCATTTGGAGGGCCAGCAGAAAGTAATGCTGCAAACTACACAGTTGATGGAAATGCTGTGGAGAGTGATCATGGGAGCAATGGACAGGACGGAACCTTGACACTGAGGACAGTAAATGTGGAAAATGGCAATGTGGCTGTTGGGAGCATTGGAGTTGGTGGCATTGATAGGAAAAACATTGGAAATGTGGCAGATGAAGGACGACTTGCATTGAGAGAAGCTGCTTTGACAAAATTTCGTCAAAAGAGAAAAGAAAGATGCTTTGAGAAAAGGGTTCGATATCATAGCAGGAAGAAACTAGCAGAACAGCGGCCTCGTATTAGGGGACAATTTGTTAGACGAATAGTGTCTGAAGCCAAAGAAGATAAAGATCACCAAAGTGACAACCGGGTACCTGGGGATAATAGCGACATCCCTCAATAA 1572 0.4205 MQSSWTKCLAQVGSPRPVSPHKQLVDAPDSTCAQVMQTKTEKVSSRWVHATEKECLELIDHLDDVAMGKDLAVGISLNMQLDHRLEELSSHPMGKGANKMSDVDNMQIVKGQGNVCENAQLEYNGGKTRTQENQTMNVIDFTDSNSPQAESRDLNTPNGFSGFSLTKENCCPKEHPSLELTLKRLGEVRDAKNVTGEECNVLRHSDQSAFSKYNTASSANQAQTGNVGSCSPLANGSAAPNAEVIHNFPSHSNVTPPNQQSNGSNNINDMASTNTYLGTKPCTFDKMPESVRGMGSFNSSELQTLPNNGISSSQKKTFAREEYMEIVRGQMGGSEHEFQVEHTHYELQHYNHISHKATVDLQSDHDLLLKSSPNTAQQCVSSNAFGGPAESNAANYTVDGNAVESDHGSNGQDGTLTLRTVNVENGNVAVGSIGVGGIDRKNIGNVADEGRLALREAALTKFRQKRKERCFEKRVRYHSRKKLAEQRPRIRGQFVRRIVSEAKEDKDHQSDNRVPGDNSDIPQ* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01075 523 ProSiteProfiles CCT domain profile. 455 497 IPR010402 GO:0005515
Phac11g01075 523 Pfam CCT motif 455 496 IPR010402 GO:0005515
Phac11g01075 523 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 181 497 IPR045281 GO:0009909
Phac11g01075 523 MobiDBLite consensus disorder prediction 497 514 - -
Phac11g01075 523 MobiDBLite consensus disorder prediction 497 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01075 Phac-Chr11 7058942 7063152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01075 446 507 Response Regulator Gene Family AT5G02810 70.968 5.77e-22 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac11g01075 CCT 1.1e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01075 K12129 - gmx:100785796 697.582