Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01073 ATGGGTTGCTTTTGTTGCGCAGGGAAATCATGCACCAATTCGGATACCGAAGACTATGGCCAAAACTTCGACCACAAACCCTCCAATTTCACAGCCGCAGAAAGCGTCAAGGTTGATTTCAAAGTGAATGGGAAAAAGGAAGATGGTTCTAAAGGTGATCAGCTTGCTCTGGACGTGAAGGATTTAAATTTGAAAGAGGAGGGTTCTCATGTTGGAAAAGATAATGGCAATCGGGCGCAGTCATTCAGTTTTAATGAACTTGAAGCTGCGACGGGAAATTTTACGGCAGATTGCTTTTTGGGTGAAGGAGGCTTTGGCAAGGTTTACAAGGGACACTTGGAGAGAATAAACCAGGTTGTAGCTATAAAGCAACTTGACCCTAATGGACTTCAAGGGATACGAGAATTCGCAGTTGAAGTGTTGACATTGAGTTTGGCAGACCACCCTAATCTTGTCAAGTTGATTGGATTTTGTGCTGAGGGAGAGCAGAGGCTATTAGTTTATGAATTCATGCCATTGGGTTCTTTGGAGAATCATTTGCTTGATCTTCGGCCTGGTAGCAAACCACTGGATTGGAACACAAGAATGAAAATAGCAGCTGGGGCAGCAAGGGGTTTGGAGTATCTGCATGATAAAATGAAGCCTCCTGTCATATATCGTGACTTGAAATGCTCTAACATTTTGTTAGGAGAGGGATTTCATCCTAAGTTGTCAGATTTTGGCCTGGCAAAAGTAGGCCCAAGTGGTGATAAGACCCATGTTTCAACAAGGGTTATGGGCACATATGGGTATTGTGCTCCAGATTATGCAATGACGGGTCAGTTGACATTTAAGTCAGATATTTACAGCTTTGGGGTTGTTCTTTTGGAGCTTATTACAGGCCGGAAGGCTATTGACCATATGAAACCTGCCAAAGAACAAAATCTAGTTGCATGGACATGGACAAGTTCATGA 954 0.4319 MGCFCCAGKSCTNSDTEDYGQNFDHKPSNFTAAESVKVDFKVNGKKEDGSKGDQLALDVKDLNLKEEGSHVGKDNGNRAQSFSFNELEAATGNFTADCFLGEGGFGKVYKGHLERINQVVAIKQLDPNGLQGIREFAVEVLTLSLADHPNLVKLIGFCAEGEQRLLVYEFMPLGSLENHLLDLRPGSKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGFHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHMKPAKEQNLVAWTWTSS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01073 317 Gene3D Transferase(Phosphotransferase) domain 1 171 317 - -
Phac11g01073 317 FunFam probable serine/threonine-protein kinase RLCKVII 66 170 - -
Phac11g01073 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Phac11g01073 317 SMART serkin_6 94 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01073 317 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Phac11g01073 317 Pfam Protein tyrosine and serine/threonine kinase 99 305 IPR001245 GO:0004672|GO:0006468
Phac11g01073 317 SUPERFAMILY Protein kinase-like (PK-like) 80 312 IPR011009 -
Phac11g01073 317 ProSiteProfiles Protein kinase domain profile. 94 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01073 317 Gene3D Phosphorylase Kinase; domain 1 79 170 - -
Phac11g01073 317 FunFam Serine/threonine-protein kinase PBS1 171 316 - -
Phac11g01073 317 PANTHER OS07G0668900 PROTEIN 47 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01073 Phac-Chr11 7038564 7043572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01073 75 312 Glycoside Hydrolase AT3G07070 69.328 3.06e-119 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phac11g01073 PK_Tyr_Ser-Thr 8.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01073 - - gmx:100804000 571.237