Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01069 ATGAGAGTGAGAAGAATGGAGGCATTTCCCAGGGACCAACGTGGCTCGCTCGAAGTGTTCAACCCTTCGTCGTCTTCTTACTCCAACGAGAAGCCGGTAAACTCGCCATTACGCACTCAATCCACGTGGAAGACGTGGGTTGACTCACGCGTCGAAGAGCCAGCGGAGAAGCAGCAACGTGGCGGCGGTCCCGATGAGGTCACCGCCACGTCGTGGATGGCGCTAAAGGATTCTACTCCGCCGCCGCCATCACAAACACTCGCCGCGGTGCTCGGCGAGCCTCCGGCGGAGGTCGGAAACGCCGCGAAGCGCGCCGCGGAATGGGGTCTGGTGCTGAAGACGGACACGGAAACCGGGAAGCCGCAGGGAGTGGCGGTTCGGACCTCCGGCGGGGAGGAGCCGGGCGTGAAGGTGAGCGGTGGGTCGAGGAGGGACTCCGGCAACTCCGTTCGAAGCTCCGGCGAGTCCTCCGACGACGGGAGGGAGTACCGGGGAGGAATCCCGAGGGTTTCGGAGGACCTGAGGGACGCTTTGTCGGCGTTTCAGCAAACTTTCGTGGTTTCGGATGCTACCAAACCCGATTACCCGATAATGTACGCCAGTGCCGGGTTTTTCAAGATGACGGGTTATACGTCGAAGGAGGTGATAGGGAGAAACTGCCGGTTTTTGCAGGGAGCAGACACGGATCCGGAAGATGTGGCAAAGATAAGGGAGGCCTTACAAACTGGGCAGACCTACTGTGGAAGGTTACTCAATTACAAGAAGGACGGAACACCCTTTTGGAACCTTCTCACTATTGCTCCCATCAAGGACCACGATGGCAGAGTCCTTAAATTAATAGGAATGCAAGTGGAGGTTAGCAAGCATACAGAGGGAAACAAGGAGAACATGCTACGTCCCAATGGATTACCCGAATCCTTGATTCGATACGATGCTCGTCAGAAAGAGAAGGCAAATAGTTCAGTATCTGAGTTGTTGCTGGCTGTGAGGAGGCCACGGGCAGTGAGTGAATCAGGAGGTCGTCCCTTGATCAGAAAGTCAGCATCCGGTGATGATGATCAAGATAAACCAGAAAAGTCATCCAGGAGAAAATCTGAGAGTGTGGCTTCTTTTAGACGTAAATCACATGCAGGAGACAGAACTTCAATGGAGAGAATCACTGAGCTACCTGAAAACAAACACAAGACATCTCGTCGCCGTTCCTTCATGGGGTTCATCAGGAAAAATCAGTCCAAGTTTGGAAGCTTCAATGACGAAGCTGTTATTGAGGATAGCTCTGAGAGTAGTGATGAGGATGGTGAGAGGTCTGGTAATTTTGATGGCAAAGTACAGAGAAAGGAAAAGAGAAAGGGTCTTGATCTTGCTACCACACTTGAACGTATTGAGAAGAACTTTGTCATTACTGATCCCAGGCTACCTGATAACCCCATTATCTTTGCATCTGATAGCTTCTTGGAGCTTACGGAGTATAGTCGTGAAGAAATATTGGGAAGAAACTGCAGGTTTCTGCAAGGGCCTGAAACTGATCCAGCAACAGTGAGAAAAATTAGAGAGGCTATTGACACTCAAACTGACGTCACTGTGCAACTCATCAATTATACAAAGACTGGTAAAAAGTTCTGGAACTTGTTTCATTTGCAACCTATGCGTGATCAGAAGGGAGAGGTACAGTACTTTATTGGAGTTCAACTTGATGGTAGTCAACATGTGGAGCCTCTTCACAACCGCATTGCAGAAAATACGGCAAAAGAGGGAGAAAAATTGGTAAAAGATACTGCTGAAAATGTCGATGATGCATTGAGAGAACTTCCAGATGCTAATTTGAAACCAGAAGATTTATGGATGAACCATTCAAAAGTGGTTCACCCCAAACCACATAGGAGGGATGAAGCTGCTTGGAAAGCTATTCAGAAGATACTAGAAAGTGGAGAGCAGATAGGCTTGAATCATTTTAAGCCAGTTAAACCTTTGGGATCAGGAGATACCGGCAGTGTCTATCTGGTGGAGCTAGGTGAAACTGGCCAATATTTTGCCATGAAAGCTATGGAGAAGGGCATTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACAGAGAGAGAGATCCTCGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCCTTCCAGACCAAAACACATGTTTGTTTGATAACCGATTATTGTTCTGGGGGAGAACTATTCCTTCTTCTTGACCGACAGCCAGCTAAGGTTCTCAGGGAAGATGCAGTGAGATTTTATGCGGCTGAAGTAGTTGTTGCATTGGAGTATCTTCATTGTCAAGGGATAATATATCGGGATTTGAAGCCAGAAAATGTGTTACTACAAAGCAGTGGACATGTGTCCCTAACAGATTTTGATTTGTCATGTTTGACATCTTGCAAACCACAGCTTATAGTTCCATCTATAAATGAAAAGAAGAAAGCTCAGAAAGGCCACCAACCTCCCATATTCATGGCAGAACCTATGAGGGCATCAAACTCTTTTGTGGGCACAGAAGAATACATAGCTCCGGAAATTATAACGGGTTCAGGCCATTCTAGTGCTGTGGATTGGTGGGCTCTTGGAATTCTTCTATATGAAATGTTTTATGGATATACACCATTCAGGGGAAAGACCAGGCAAAGAACATTCACAAATATTCTTCACAAGGACCTTAAATTTCCCAAAAGTAAACAGGTAAGTTTCAGTGCAAAGCAGTTAATGTACCGGTTGCTGAACAGAGACCCCAAAAGCAGATTGGGTTCAAGAGAAGGAGCAAATGAAATTAAGAATCATCCATTCTTTCGGGGTGTCAATTGGGCTCTAGTTCGTTGCACGAAGCCTCCTGAGCTTGATGCTCCTCTCTTCGACACAACTCAAGGAGAAAAGGAAGCCAATTTTGAAGATCAAGTGCAAGAGGAGATGAACGTCTTCTGA 2946 0.4722 MRVRRMEAFPRDQRGSLEVFNPSSSSYSNEKPVNSPLRTQSTWKTWVDSRVEEPAEKQQRGGGPDEVTATSWMALKDSTPPPPSQTLAAVLGEPPAEVGNAAKRAAEWGLVLKTDTETGKPQGVAVRTSGGEEPGVKVSGGSRRDSGNSVRSSGESSDDGREYRGGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALQTGQTYCGRLLNYKKDGTPFWNLLTIAPIKDHDGRVLKLIGMQVEVSKHTEGNKENMLRPNGLPESLIRYDARQKEKANSSVSELLLAVRRPRAVSESGGRPLIRKSASGDDDQDKPEKSSRRKSESVASFRRKSHAGDRTSMERITELPENKHKTSRRRSFMGFIRKNQSKFGSFNDEAVIEDSSESSDEDGERSGNFDGKVQRKEKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDTQTDVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIAENTAKEGEKLVKDTAENVDDALRELPDANLKPEDLWMNHSKVVHPKPHRRDEAAWKAIQKILESGEQIGLNHFKPVKPLGSGDTGSVYLVELGETGQYFAMKAMEKGIMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYCSGGELFLLLDRQPAKVLREDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSSGHVSLTDFDLSCLTSCKPQLIVPSINEKKKAQKGHQPPIFMAEPMRASNSFVGTEEYIAPEIITGSGHSSAVDWWALGILLYEMFYGYTPFRGKTRQRTFTNILHKDLKFPKSKQVSFSAKQLMYRLLNRDPKSRLGSREGANEIKNHPFFRGVNWALVRCTKPPELDAPLFDTTQGEKEANFEDQVQEEMNVF* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01069 981 PANTHER FLIPPASE KINASE 1-RELATED 162 961 - -
Phac11g01069 981 FunFam LOV domain-containing protein 650 734 - -
Phac11g01069 981 FunFam Putative LOV domain-containing protein 735 950 - -
Phac11g01069 981 Gene3D PAS domain 184 338 - -
Phac11g01069 981 ProSiteProfiles PAC domain profile. 524 578 IPR000700 -
Phac11g01069 981 ProSiteProfiles Protein kinase domain profile. 651 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01069 981 Gene3D Phosphorylase Kinase; domain 1 650 734 - -
Phac11g01069 981 ProSiteProfiles PAS repeat profile. 450 523 IPR000014 -
Phac11g01069 981 SUPERFAMILY PYP-like sensor domain (PAS domain) 191 283 IPR035965 -
Phac11g01069 981 MobiDBLite consensus disorder prediction 17 47 - -
Phac11g01069 981 Pfam Protein kinase domain 653 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01069 981 CDD STKc_phototropin_like 650 957 - -
Phac11g01069 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 772 784 IPR008271 GO:0004672|GO:0006468
Phac11g01069 981 Gene3D Transferase(Phosphotransferase) domain 1 735 950 - -
Phac11g01069 981 SMART pas_2 452 521 IPR000014 -
Phac11g01069 981 SMART pas_2 172 241 IPR000014 -
Phac11g01069 981 MobiDBLite consensus disorder prediction 1 89 - -
Phac11g01069 981 FunFam Putative LOV domain-containing protein 184 340 - -
Phac11g01069 981 NCBIfam PAS domain S-box protein 197 291 IPR000014 -
Phac11g01069 981 NCBIfam PAS domain S-box protein 475 565 IPR000014 -
Phac11g01069 981 SUPERFAMILY PYP-like sensor domain (PAS domain) 466 565 IPR035965 -
Phac11g01069 981 ProSiteProfiles PAS repeat profile. 170 241 IPR000014 -
Phac11g01069 981 Pfam PAS domain 473 565 IPR000014 -
Phac11g01069 981 Pfam PAS domain 191 287 IPR000014 -
Phac11g01069 981 SUPERFAMILY Protein kinase-like (PK-like) 635 958 IPR011009 -
Phac11g01069 981 FunFam LOV domain-containing protein 439 603 - -
Phac11g01069 981 MobiDBLite consensus disorder prediction 336 400 - -
Phac11g01069 981 ProSitePatterns Protein kinases ATP-binding region signature. 657 680 IPR017441 GO:0005524
Phac11g01069 981 SMART serkin_6 651 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01069 981 MobiDBLite consensus disorder prediction 346 398 - -
Phac11g01069 981 MobiDBLite consensus disorder prediction 417 446 - -
Phac11g01069 981 ProSiteProfiles PAC domain profile. 244 298 IPR000700 -
Phac11g01069 981 CDD PAS 465 565 IPR000014 -
Phac11g01069 981 CDD PAS 197 286 IPR000014 -
Phac11g01069 981 MobiDBLite consensus disorder prediction 431 446 - -
Phac11g01069 981 MobiDBLite consensus disorder prediction 113 167 - -
Phac11g01069 981 SMART pac_2 527 569 IPR001610 -
Phac11g01069 981 SMART pac_2 247 289 IPR001610 -
Phac11g01069 981 Gene3D PAS domain 439 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01069 Phac-Chr11 7011316 7022464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01069 8 981 AGC Kinase Gene Family AT3G45780 69.007 0.0 1316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phac11g01069 Pkinase 8.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01069 K20715 - gmx:100804524 1762.66