Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01023 ATGCACGTACCATTGCTACTACTCCCTCTGTTTCATAAAAACTGCAGTTTAAGTTCTCTGAGTGCTAATCGACTAACGGGTTCAATTCCCCCAGAGCTAGCAAACATCTCCACTCTCCAAAGTTTGACCCTTGAATTCAACCAACTCTCTGGAAATCTTCCTAGTGAGCTTGGGAATCTTCCAAGTATTCAAAGATTGCTACTTACCTCCAACAATTTTACTGGAGAGTTGCCTGCAACATTTGCAAGACTCACTACCTTGCAGGAAGTTCGACTAGGGGACAACCAGTTCTCTGGAAAGATACCTGATTTTATTCAAAGCTGGACAAGTCTCCAGAAACTAGTGATTCAAGGAACTGGATTAAGTGGGCCAATTCCTTCTGGAATTTCACTACTTGAAAGTTTAACAGACTTGAGAATTAGTGACATTGACGGATCAGACCATTTTCCTTTTCCCCAACTTAACAATCTGTCAAATTTGGAAATTTTAATTCTGAGGAGTTGCAATATTAATGGAACCATACCTGAATATCTTGGGACTATGTCTAATTTACAAACCTTGGACCTCAGCTTTAACAAATTAAGTGGACAAATTCCAAGCAGCTTTGAGTATGGCCTAAGAAAGATAGAATATATATATTTAACTGGAAACATCCTCACGGGATCTGTACCTGCATGGGCAGAGAAAGATAAAAATGTAGATCTTTCGTACAATAACTTTAGCATGGAAAACTCAGGGCAGCAGCCATGTCAACGTGGAAATGTGAACTTGTTTGCAAGCTCCTCGATGGACAATAGCTCAGAATCCATTTCATGTTTAAAAAGTGTTGCTTGTCCTAAAAAATCATACTCTCTTCATATAAATTGTGGTGGAAAGCAAGTAACAGTCAATGGAAATGAAACATATGATGACGATACAGATAATGCAGGACCAGCAAGATTCCACTTAAGTGGAAAAAACTGGGGATTTAGCAGCACTGGTCACTTCATGGATAATGACCGTGCAGAATATTATATTTGGCTAAATCAATCTAAGCTTTTCATGGATGATGCTGAATTATACATGGATGCACGTGTTTCTCCCATTTCTCTTACTTATTATGGATTTTGCCTGGGAAATGGAAACTACACGGTGAGTCTACGCTTTGCAGAGGTCATGTTTACTGAAGATCAAACATATAACAGCCTAGGAAGGCGCATATTTGATGTCTACATTCAGGGAAATTTGGTGCTGAAGAATTTTAACATTGCAGAAGAAGCAGGAGGAGTTAATAAAGCAATCACAAAATCATTTACCATTGTGATTAGTACTAACACGTTGGAAATCCGCCTATATTGGGCTGGGAAAGGGACAATTGGTATTCCATTTAAATCAGTATATGGTCCTCTCATATCAGCTATTTCTGTAAATCCCAACTTCATTCCTCCCTCAGAAAACGGAAGTAGAATGTCTGCAGGTGCCGTGGTTGCAATTGTGGCCAGTGTAGCAGTTTTTCTAGTCCTGGTATTTGGTATACTTTGGTGGAAAGGCTGTCTGGGACAGAAAAGTTCTTTAGCAAAAGAGCTAAAGGGTTTAAAATTGCAAATGGGTATATTTACCTTACGACAAATCAAAGTAGCAACAAACGACTTCAATAAAGCCAACAAAATTGGAGAAGGAGGGTTTGGTCCTGTGTACAAGGGAACTTTATCAGATGGTACAATAATAGCAGTCAAGCAGCTTTCTTCCAAATCAAGTCAAGGGAATCGTGAGTTTCTAAATGAGCTTGGCATGATTTCAGCTTTGCAACACCCTTGTCTTGTTAAACTTTATGGATGTTGTGTCGAGGGAGATCAATTATTGTTGGTCTATGAATATATGGAAAACAATAGCCTTGCTCGCGCTTTGTTTGGTGCAGAAGAACACCAAATAAAATTGGATTGGCCTACAAGGAAAAAAATCTGTGTTGGTATTGCCAAAGGTTTGGCATACCTCCATGAAGAATCGAAATTGAAAATTGTTCATAGGGACATCAAGAGCACTAATGTGTTACTTGATAAAGATCTCAAACCAAAGATATCTGACTTTGGTTTAGCCAAGCTCGATGAAGAGGACAATACCCACATAAGCACTCGAATTGCTGGAACTTATGGATACATGGCTCCCGAGTATGCCATGCATGGCTATTTGACTGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAAATTATAAGTGGAAGGAGCAATATGATTCAACGACATAAAGAGACATCATTCCATCTTCTTGATTGGGCACATATGCTAAAAGAGAGTGATAATTTAATGGAGTTAGTTGATAGTAGATTGGGTTTGGACTTCAACAAAAAGGAGGTTACCACAATGATCAATGTGGCTCTTTCATGCACCAATGTCACTGCCTCCCTTAGGCCTACAATGTCCTTAGTGGTAAGCATGCTTGAAGGTAGATCTATTGTCCAGGAGTTCATTTCAGAGTCAAGTGAGGCATTGAATGGGAAGAAGTTGGAAGCAATACTACACCATTACCAAGAGATAGAAGAAAACAATTTAGGTGAGACCAACAATCAGAGTCTCTCAGTGGATGAAACATTGGCCACTTCTTCTATACCTGTAACAGATCTATATCCTGTAGACATGAATTCCTCATACTGGGAGAAAAGGGGTTGGTGA 2676 0.3928 MHVPLLLLPLFHKNCSLSSLSANRLTGSIPPELANISTLQSLTLEFNQLSGNLPSELGNLPSIQRLLLTSNNFTGELPATFARLTTLQEVRLGDNQFSGKIPDFIQSWTSLQKLVIQGTGLSGPIPSGISLLESLTDLRISDIDGSDHFPFPQLNNLSNLEILILRSCNINGTIPEYLGTMSNLQTLDLSFNKLSGQIPSSFEYGLRKIEYIYLTGNILTGSVPAWAEKDKNVDLSYNNFSMENSGQQPCQRGNVNLFASSSMDNSSESISCLKSVACPKKSYSLHINCGGKQVTVNGNETYDDDTDNAGPARFHLSGKNWGFSSTGHFMDNDRAEYYIWLNQSKLFMDDAELYMDARVSPISLTYYGFCLGNGNYTVSLRFAEVMFTEDQTYNSLGRRIFDVYIQGNLVLKNFNIAEEAGGVNKAITKSFTIVISTNTLEIRLYWAGKGTIGIPFKSVYGPLISAISVNPNFIPPSENGSRMSAGAVVAIVASVAVFLVLVFGILWWKGCLGQKSSLAKELKGLKLQMGIFTLRQIKVATNDFNKANKIGEGGFGPVYKGTLSDGTIIAVKQLSSKSSQGNREFLNELGMISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLARALFGAEEHQIKLDWPTRKKICVGIAKGLAYLHEESKLKIVHRDIKSTNVLLDKDLKPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIISGRSNMIQRHKETSFHLLDWAHMLKESDNLMELVDSRLGLDFNKKEVTTMINVALSCTNVTASLRPTMSLVVSMLEGRSIVQEFISESSEALNGKKLEAILHHYQEIEENNLGETNNQSLSVDETLATSSIPVTDLYPVDMNSSYWEKRGW* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01023 891 SUPERFAMILY L domain-like 20 226 - -
Phac11g01023 891 Gene3D Ribonuclease Inhibitor 6 147 IPR032675 -
Phac11g01023 891 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 282 472 - -
Phac11g01023 891 Pfam Protein kinase domain 544 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01023 891 SMART serkin_6 544 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01023 891 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Phac11g01023 891 Gene3D Phosphorylase Kinase; domain 1 512 619 - -
Phac11g01023 891 ProSiteProfiles Protein kinase domain profile. 544 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01023 891 ProSiteProfiles Leucine-rich repeat profile. 183 205 IPR001611 GO:0005515
Phac11g01023 891 Gene3D Ribonuclease Inhibitor 148 246 IPR032675 -
Phac11g01023 891 CDD STKc_IRAK 550 817 - -
Phac11g01023 891 FunFam Leucine-rich repeat transmembrane protein kinase 80 285 - -
Phac11g01023 891 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 840 - -
Phac11g01023 891 FunFam Putative LRR receptor-like serine/threonine-protein kinase 620 827 - -
Phac11g01023 891 SUPERFAMILY Protein kinase-like (PK-like) 528 819 IPR011009 -
Phac11g01023 891 Pfam Malectin domain 284 467 IPR021720 -
Phac11g01023 891 Gene3D - 280 472 - -
Phac11g01023 891 Pfam Leucine rich repeat 158 217 IPR001611 GO:0005515
Phac11g01023 891 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 513 619 - -
Phac11g01023 891 Gene3D Transferase(Phosphotransferase) domain 1 620 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01023 Phac-Chr11 6651055 6668448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01023 20 847 Receptor kinase-like Gene Family AT1G53420 57.485 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g01023 Pkinase 5.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01023 - - gmx:732563 1229.16