Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01021 ATGGCGAATTCTAGAATTACCATTGGAAATCCTTCAGAGTTTGGCCAAGCCAATGCATTGCAGGCTGCTCTTGCTGAGTTCATCTCAATGCTAATATTTGTCTTTGCAGGGGAAGGCTCTGGAATGGCTTTTAACAAACTGACAAACAATAGTCCAGCAACAGCAGATGGGGTGGTGGCAGCAGCACTGTCTCATGCATTTGCTCTTTTTGTTGCTGTCTCAGTTGGTGCTAACATCTCAGGTGGCCATGTTAACCCTGCTGTCACATTTGGTGCCTTTATTGGTGGCCACATAACCCTCCTCAGAGGCCTTTTGTACTGGATCGCTCAGTTGCTTGGCTCTGTAGTGGCTTGCTTCCTGCTTAAATTTGCCACTGGTGGATTGGAGACATCTGCATTCTCGTTATCTCCTGGGGTGGGAGCTGCAAATGCACTAGTTTTTGAGATTGTGATGACTTTTGGTTTGGTTTACACAGTGTATGCCACTGCAGTGGACCCAAAGAAGGGCCAACTTGGTATAATTGCTCCAATGGCAATTGGTTTCATTGTGGGTGCAAACATCTTAGCTGGTGGTGCCTTTGATGGTGCATCCATGAACCCAGCAGTTTCCTTTGGGCCCGCTGTTGTTAGTGGGATATGGGCCAACCATTGGGTCTACTGGGTTGGCCCATTAATTGGCTCTGCTATTGCTGCTGTTGTGTACAGCACTTTCTTCATCACTCCAAACTCTTATGAACAGCTATCCGTCGCAGATTATTAG 759 0.4704 MANSRITIGNPSEFGQANALQAALAEFISMLIFVFAGEGSGMAFNKLTNNSPATADGVVAAALSHAFALFVAVSVGANISGGHVNPAVTFGAFIGGHITLLRGLLYWIAQLLGSVVACFLLKFATGGLETSAFSLSPGVGAANALVFEIVMTFGLVYTVYATAVDPKKGQLGIIAPMAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSGIWANHWVYWVGPLIGSAIAAVVYSTFFITPNSYEQLSVADY* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01021 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Phac11g01021 252 CDD MIP 26 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g01021 252 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g01021 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g01021 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g01021 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g01021 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g01021 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g01021 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac11g01021 252 FunFam Probable aquaporin TIP1-1 4 252 - -
Phac11g01021 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Phac11g01021 252 PANTHER AQUAPORIN-8 6 246 IPR034294 -
Phac11g01021 252 SUPERFAMILY Aquaporin-like 18 243 IPR023271 -
Phac11g01021 252 Coils Coil 249 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01021 Phac-Chr11 6639137 6640256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01021 1 252 Major Intrinsic Protein MIP AT4G01470 75.397 2.78e-132 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01021 K09873 - gmx:100777419 453.366