Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00992 ATGGTTTTCTCCTCTATTCCAGTCTTTGTAGATCCTCCCAATTGGCAGCAGCAACCGAACCATCCTCAAGCCAATGGCAGTGATAACACTCAGCTTCTTCCACCTTTGCCACCACAGCAGACTCATGTGGGAGGTTCCGTGGGATCAATCAGACCAGGTTCTATGGCTGATCGAGCTAGGCTAGCTAAGATACCTCCTCCTGAAGCAGCTCTCAAGTGTCCACGTTGTGAATCCACCAACACTAAATTTTGCTATTTCAACAACTATAGCCTCTCTCAACCACGCCACTTCTGCAAGACTTGTAGGCGTTATTGGACAAGAGGGGGTGCTCTAAGAAACGTTCCTGTGGGTGGAGGCTGCCGTAGGAACAAGAAGAACAAAAGGAGTCGCTCTAAGTCTCCTGCATCATCTGAGAAACAAACACTCTCTGCTTCTTCCGGTGCACTCCCCTCTGCTGGAAACACTCACGAGCTTATAAACCAGTTGCCACAACCACCGAACCTTCCCTTCATGGCATCCCTCCAGAACCTCAACCTGAACCGTTATGCTGTTGGAAACATGGGTCTTGGCTTGCGTGAGATTCACGGACAGAACGATCACATGGGGTTTCAAATTGGTGGCAGCGGTAATTCCTCTGCTGGTGGAGGAATGGATCAGTGGCGCTTGCAGCAGATTCCTTTCTTGAATGGTTTTGAATCAGCTTCATCTGCTTCATACCATTTTCAAAACGAAGGTATTGAAACACCTTCTGGGTTGGTTGGAGATTTAGCAACGAATTCTAGGGTTTCTCAGATTCCATCGGTTAAAATGGAAGAAAGTGGAGCTTTAAATTTGTCAAGATCACCACTGAACGTCTCAGAAAATAACCACTACTATTCATGGACTGATATGTCAGGTCTTTCCTCTTCTTCTGCTAGTCATCTCTTGTAA 930 0.4677 MVFSSIPVFVDPPNWQQQPNHPQANGSDNTQLLPPLPPQQTHVGGSVGSIRPGSMADRARLAKIPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKRSRSKSPASSEKQTLSASSGALPSAGNTHELINQLPQPPNLPFMASLQNLNLNRYAVGNMGLGLREIHGQNDHMGFQIGGSGNSSAGGGMDQWRLQQIPFLNGFESASSASYHFQNEGIETPSGLVGDLATNSRVSQIPSVKMEESGALNLSRSPLNVSENNHYYSWTDMSGLSSSSASHLL* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00992 309 MobiDBLite consensus disorder prediction 11 47 - -
Phac11g00992 309 ProSitePatterns Zinc finger Dof-type signature. 73 109 IPR003851 GO:0003677|GO:0006355
Phac11g00992 309 MobiDBLite consensus disorder prediction 11 53 - -
Phac11g00992 309 ProSiteProfiles Zinc finger Dof-type profile. 71 125 IPR003851 GO:0003677|GO:0006355
Phac11g00992 309 MobiDBLite consensus disorder prediction 115 161 - -
Phac11g00992 309 Pfam Dof domain, zinc finger 70 125 IPR003851 GO:0003677|GO:0006355
Phac11g00992 309 MobiDBLite consensus disorder prediction 135 161 - -
Phac11g00992 309 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 43 221 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00992 Phac-Chr11 6371265 6375449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00992 38 308 C2C2-Dof Transcription Factor Family AT3G55370 44.079 2.26e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac11g00992 zf-Dof 1.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00992 - - gmx:100816635 491.5