Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00980 ATGGGAAACGGCATAGGGAAGTTGACGGTGTGCTTCACCGGAAATAACGGTGGGGGTCGTCGGAAGCACGATATATCCATTTTAATAACAGAGCCTCTGGACGAGGGTTTGGGTCACTCGTTCTGCTACGTTAGACCGGACCCGACCCGGATATCGTCATCGAAGGTGCACTCGGAGGAAACGACGACGTTCAGAACAATCTCGGGCGCGTCGGTGAGCGCGAACACATCGACGCCGTTATCGACGGCTTTCGTGGACTTGTACTCCTACGGTTGCATAGACCGAGCGGCGGCGTTCGAGAGTTCAACGTCGTTCGCGTCGCTTCCACTGCAACCGATTCCGCGGAACCTGCTGAACTCAGGGCCCTTCTCGGGGAACCTGGGCGGTGGTGGGTTTCCGGGCTCAGGCCCGCTGGAGAGGGGTTTCATGTCGGGGCCCATCGAGCGCGGGTTCATGTCGGGGCCCATCGATCGTGGGCTTTTTTCGGGGCCGATGGAGCGGGAGGGAAACGGATCGGATCATTTCCCGAGAAGCTTCTCGCACGGAGGGTTGGGTTTAGGTTTGGGATTAGGTTTGAGAGTGAGAACGAGGAAGGGTCGGTGGATTCGTGTTTTGCGGAGGGCGATTTCGAAGACTCTCTCTCGGGGGCAGAACTCGATTGTGGCTCCGATCAAAGGGGTAGTGGTAAAGGAGCCGGAGTGGATGGTGGCTGCGGCGGAGAAGCACAATGAGAATCTGAGCGTGAATTTGAGTAGTGAGGGGAGCTTGGAGGACGATGATTCTATGGAGAGTCAGAATCTTCAATGGGCTCAGGGGAAAGCAGGGGAAGATCGTGTCCATGTTGTTGTGTCTGAGGAACACGGTTGGGTTTTCGTGGGGATCTATGACGGTTTCAATGGACCCGATGCCCCTGATTACCTTCTTTCGAATCTCTACACCGCGGTGCACAAGGAGCTGAAAGGGTTGTTGTGGGATGATGGGTCTGCACCGGAAAATTCGATCCCTAAAGAGGACGTATTGCGAGGTGTCACAGACGTTGCAGGTGTTAAAGATGTAGATGCCTGTTCTCACTGTGTTGAGCAAGAAAATAACGACTGCTATAAGAGTTCTAATAAGAAAGTTAGGAATTCGAGGAACAAGTACAAAGGTGCTGCGAATAAGTGGGAGGAGAATCAACGGAGGTGGAAGTGTGAGTGGGACAGGGAGAGGTTAGAGCTTGATCGGAGATTGAAGGAGCAACTGAATTTAAGCCGATCTGGGTCTGGTGGAGCAGTAAGTTCGATTAATCACGCGGATGTTTTGGAAGCTCTTTCTCGGGCTCTGAGGAAGACTGAGGAGTCTTACCTTGATGTTGCGGATAAGATGGTGATGGAGAATCCTGAACTTGCCTTGATGGGTTCTTGTGTTCTTGTAATGTTGATGAAGGGGGAGGATGTTTACGTGATGAATGTGGGGGATAGTCGTGCTGTGCTGGCTCAGAAGGCTGAGCCTGATTATTGGCTCGGCAAGATCAGGCAGGACTTGGAGAGGATCAATGAGGAAACCATGAATGATCTTGAATCTTGGGATGTTGATAACTCCAACTTGGTTCAAAATCTTAGTGCGATTCAGCTTACTAAAGATCACAGTACTAGTGTTGAAGAGGAAATCCAGAGAATTAAAAAGGAGCACCCGGATGATCCTTGTGCTGTTGTAAATGACCGTGTCAAGGGTTCTCTCAAGGTTACCCGAGCATTTGGTGCCGGATTTCTCAAACAGCCCAAGTGGAACAACGCACTTCTGGAGATGTTTAGAATAGACTACGTAGGAAACTCTCCTTACATCAGCTGCCTACCATATCTAAAACACCACAGATTAGGTCCAAAGGACAAATTTTTGATTCTATGCTCCGATGGGCTCTATCAGTACTTGTCAAACGAAGAGGCAGTGGCTGAAGTTGAGCATTTCATCACATTACAACCTGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTGTTATTTCGTGCTGCAAAGAAAGCTGGGTTGGTGTTTCACGAGTTGCTCGAAATTCCACAGGGTGATAGGCGCCGTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAGGGAAGGATATGGAGATCATGTGTATAA 2139 0.5026 MGNGIGKLTVCFTGNNGGGRRKHDISILITEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNLLNSGPFSGNLGGGGFPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPMEREGNGSDHFPRSFSHGGLGLGLGLGLRVRTRKGRWIRVLRRAISKTLSRGQNSIVAPIKGVVVKEPEWMVAAAEKHNENLSVNLSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTAVHKELKGLLWDDGSAPENSIPKEDVLRGVTDVAGVKDVDACSHCVEQENNDCYKSSNKKVRNSRNKYKGAANKWEENQRRWKCEWDRERLELDRRLKEQLNLSRSGSGGAVSSINHADVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDNSNLVQNLSAIQLTKDHSTSVEEEIQRIKKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVEHFITLQPEGDPAQHLVEEVLFRAAKKAGLVFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00980 712 SMART PP2C_4 260 701 IPR001932 -
Phac11g00980 712 Pfam Protein phosphatase 2C 424 659 IPR001932 -
Phac11g00980 712 SUPERFAMILY PP2C-like 273 704 IPR036457 -
Phac11g00980 712 PANTHER PROTEIN PHOSPHATASE 2C 255 701 IPR015655 GO:0004722|GO:0006470
Phac11g00980 712 ProSiteProfiles PPM-type phosphatase domain profile. 259 703 IPR001932 -
Phac11g00980 712 FunFam probable protein phosphatase 2C 4 237 708 - -
Phac11g00980 712 Gene3D - 237 708 IPR036457 -
Phac11g00980 712 CDD PP2Cc 424 703 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00980 Phac-Chr11 6313031 6316852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00980 1 712 PP2C-type Phosphatase Gene Family AT1G07630 67.680 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00980 - - pvu:PHAVU_011G064200g 1349.73