Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00978 ATGGGAGTTTGTTTGAGCACCAAACCTAAAACTGGGTTAAACTCAAAGCATGTGAGTGCCGAGGCCAAAGATCTCAGCAGTCCAAGTAGTAAAATTACGAAAGATCTCAGTAGCACAATTAGTAAGGTCTCTGAGGTTTCGGTGCCTCTTACTCTTCAGAGTGGAGGTGAGATCTTGTATTCATCCAATCTGAAGAGCTTTAGTTTGACAGAACTTACAGCTGCCACAAGAAATTTCCGTAAGGACAGTGTGCTGGGAGAGGATGGTTTTGGATCAGTTTTTAAGGGCTGGATTGACGATCACTCACTTTCTGCAACCAAACCTGGCACGGGGGTTGTTGTTGCTGTGAAAAGACTTAGCCAGGATAGCTTCCAAGGTCACGGGGAGTGGTTGGCAAGGCATGGTATGACTCATGAAGCAAGTCTCGAGGATGAAGTAAACTATCTAGGACAGCTTTCTCATCCTCATCTAGTGAAATTAATTGGATATTGCTTTGAAGATAGAGACCGTCTTCTGGTCTATGAATTTATGCCTCGTGGTAGCTTGGAGAATCACTTGTTCATGAGAGGCTCATATTTCCAACCTCTTTCTTGGGGCCTGCGTTTGAAAGTCGCTCTTGGTGCTGCCAAAGGGCTTGCATTTCTTCACAGTGCTGAAACAAAAGTGATATATCGAGATTTCAAGACCTCAAATGTCTTGCTGGATTCAAATTATAATGCAAAGCTTGCTGATTTGGGGCTCTCAAAGGACGCACCTACACGTGACAAAAGTCATGTCTCCACCAGAGTAATGGGAACCTACGGATATGCAGCTCCAGAATATCTAGCCACAGGTCATGTGAGTGGTAAGAGTGATGTCTTCAGTTTTGGAGTTGTGCTGCTAGAACTGTTATCTGGCAGGAGGGCTGTGGACAAGAACAGACCATCAGGACAGCACAATTTGGTGGAATGGGCAAAGCCATACATGGCAAACAAGAGAAAGCTTTTGAGTGTGTTAGATAACCGTCTTGAAGGCCAATATGATATAGATGAGGCTTTTAAGGTAGCTACCCTCTCTCTGCGATGCCTTGCAACAGAATCCAAGTTGAGACCAAACATGCAAGAAGTTGTCACAGATTTGGAGCAGCTGCAGGTTCCCCATGTACATCATAATCGTTCTGTGAATACTTCTCGTGGTCGTAGAAAAAGTGCTGATGATTTAATCCATGGTAGAAGCGTTACAACTTCAGTTTCCCCTCTCTCACATGACATTGCAAATACACGTCCTTGA 1269 0.4437 MGVCLSTKPKTGLNSKHVSAEAKDLSSPSSKITKDLSSTISKVSEVSVPLTLQSGGEILYSSNLKSFSLTELTAATRNFRKDSVLGEDGFGSVFKGWIDDHSLSATKPGTGVVVAVKRLSQDSFQGHGEWLARHGMTHEASLEDEVNYLGQLSHPHLVKLIGYCFEDRDRLLVYEFMPRGSLENHLFMRGSYFQPLSWGLRLKVALGAAKGLAFLHSAETKVIYRDFKTSNVLLDSNYNAKLADLGLSKDAPTRDKSHVSTRVMGTYGYAAPEYLATGHVSGKSDVFSFGVVLLELLSGRRAVDKNRPSGQHNLVEWAKPYMANKRKLLSVLDNRLEGQYDIDEAFKVATLSLRCLATESKLRPNMQEVVTDLEQLQVPHVHHNRSVNTSRGRRKSADDLIHGRSVTTSVSPLSHDIANTRP* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00978 422 PANTHER OS01G0588500 PROTEIN-RELATED 28 377 - -
Phac11g00978 422 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 177 387 - -
Phac11g00978 422 ProSiteProfiles Protein kinase domain profile. 79 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g00978 422 Gene3D Transferase(Phosphotransferase) domain 1 177 397 - -
Phac11g00978 422 Gene3D Phosphorylase Kinase; domain 1 56 176 - -
Phac11g00978 422 Pfam Protein tyrosine and serine/threonine kinase 82 373 IPR001245 GO:0004672|GO:0006468
Phac11g00978 422 SUPERFAMILY Protein kinase-like (PK-like) 63 377 IPR011009 -
Phac11g00978 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Phac11g00978 422 FunFam Serine/threonine-protein kinase BIK1 47 176 - -
Phac11g00978 422 MobiDBLite consensus disorder prediction 380 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00978 Phac-Chr11 6289463 6293417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00978 57 373 Glycoside Hydrolase AT3G07070 45.912 2.62e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac11g00978 PK_Tyr_Ser-Thr 2.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00978 - - vun:114169806 720.309